SimpleSearch - Line and FST details
Line specific information
| Line ID | 510C01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N448889) |
| Segregation Analysis | 50:43:35 |
| Confirmed for Hit | At5g37020 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 7963 |
Gene hit At5g37020
| Sequence (A. th genome BLAST matches underlined) | >03-K019542-022-510-C01-8409 CTGCTATTTAATGACTTAAGCTTTAGGATTGGTGTTGTTTATAGGAGGAGCAGAAGGAAA CATTTGTACCGATTGAGTTGGGGATACCGAGTAAGCCATCTATGGGATCCTCCCTAGAGT GAGGCTTGCCACTCTACACTGTACGGTCTTGATTCGTTACACCATCTAAGATCTTATATG ACATACGATCGCTGCTTTATAGAGGCATAAGTCTACTGTTACTGTACGACCGGACAATTA TGACCATGAGCAGCCAATTGGACTGAAATGAGGTCTTCTACTGTCACACATACGAAACAA GCTATGGTAGCCTCCCGATATTGAGAGACTGTATCTTTGATATTTTTGGAGTAGACAAGC GTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCATTGAGTCGGAAGAGACTC TGTATGAACTGTTCGCCAGCCTTTACGGGCGAGTTCTGTTAGGTCCTCTATTGTGATCTT GTGACTCCATGGGAATTGGGGATCCTCTATGGGAT |
| GenBank Accession | BX534524 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:14630701 - go to primer design |
| BLAST e Value | 1e-40 |
| Hit Clone Code (BAC ID) | K15O15 |
| Hit Gene Code | At5g37020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | auxin response factor 8 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX534524 [GenBank] |
Gene hit At1g78180
| Sequence (A. th genome BLAST matches underlined) | >03-K019532-022-510-C01-8409 TGTCATGAGATTTCCGGACATGAAGCCATTTACATTGAATAGTATCCGTATTGACTATTT GCCCGAAACTGTGGGATCGCATCCCTATAGCGAGGCGTATTACTCATACATTATACATAT TAGGTTTTTGAGTCTGTGAATTAATAACTTAAGCTTTAGGATTGGTGTTGTTTATAGGAG GAGCAGAAGGAAACATTTGTACCGATTGAGTTGGGGATACCGAGTAAGCAACCTATGGGA TCCTCCCTATAGTGAGNCGTATTACTCAACACTGTATGTTTTTGATTCCTTAAACCATTT TAGATCAAATATGACAAAGTTCTCTGCTTTACAGTGACATAAGTATACTGTTAGTGTTCG ACAGGACAATTATGAGCATGTGTAACCAATTTGACTGAAATGTGTTCTTCTACTGGCACA GATACGAACCAAACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAANNNNNNNNNG GAGNAGACGGGGGGGNCGNGCTCCNCCNGGTTGGCGAGCATCTCCTTGTTGACATATGCC CCGCCTACACTCTGTATGAATTGTGCACCACCCGTTACGGCGGGTTCTGATAGG |
| GenBank Accession | BX534523 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:29417539 - go to primer design |
| BLAST e Value | 6e-86 |
| Hit Clone Code (BAC ID) | T11I11 |
| Hit Gene Code | At1g78180 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Mitochondrial substrate carrier family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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