SimpleSearch - Line and FST details


Line specific information

 
Line ID 515H05
Vector Used pAC161
Line Availability available as T3 set from NASC (N449433)
Segregation Analysis 50:48:37
Confirmed for Hit At2g38440
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g38440

 
Sequence (A. th genome BLAST matches underlined) 
>40-K019947-022-517-H05-8409
TGATCTGANATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGAAGTCTACATT
GGTAAGAATAACTAGGGCTCTTTTTCCCAAACGAGCTTCGCCCATTTTCCGAAACTGGTG
TGTTTCCATTTGAATGAGAAAATGAAAACTGAGGTGGGTCCTCCATTCTCTCTTCAACCG
CATCAGAATATATATGATGGTTCCCATCCTTCAAAGTATCTGATCTACTCTTAGGTCTAC
ACTCATCGTCTGTTTCTGTTTCCGACTCCATGGTGGCTGGTGCGTCCACATAATTGTCAG
CCTCACTGGTTAAATCTTCAGAATAACTCCTCTGTTGAAAAAATCCTGGCTTCCCGTTCA
AAACCGTTTGTGAATCCTGTGTAATAGTTGTTCCACGGACCTCATTGTATGTAGATTCAG
GCACTGTCTCTATATCTTTTTCAATAAAACCCCCATTCATGTTAACATTTGCCACATTTT
CCTGCTCACTTGGGAATGAAACCTCTGCTCTGCTTCCTCCATGAGACTTATCCATAGCAC
CCACCATACTGATTTCAGGTATATCGGTTACTACATCCCTATGGATCTCCCNTAAAAGGG
GGAGAANAANTCGGGGNNNTTGGGAAATTATTTCATAG
GenBank Accession BX535439 [GenBank]
Graphic View Graphic view of gene At2g38440
Predicted Position of Insertion Chr2:16097582 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T19C21
Hit Gene Code At2g38440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SCAR homolog 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37