SimpleSearch - Line and FST details


Line specific information

 
Line ID 516F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N449508)
Segregation Analysis 50:18:15
Confirmed for Hit At5g08370
Parent of DUPLO pair none
Parent of pair(s) 3241, 9696

Gene hit At5g08370

 
Sequence (A. th genome BLAST matches underlined) 
>62-K019946-022-516-F08-8409
CGGAATGAATATTTTACGTTGTGTTTCCTGGGATTGGGAAAAAACCATCGAAGAAGAGAA
ACCTTTTCCAATGATCTTGGATATCTCCTGTTGTTCTCCAACTGATGCCAATATCTCCTG
CCCAAGTTGCTGGATCCTCTTGTCCCCTGCACTTACAAGCCAATTTCTTGTTTAGTATCA
TCAGACCATAGTTGTCTGAATAAGTGAATCTTCTTCTTAATTAGTCTTTTTTACCATTCA
CACAGAGAGAAGAATATGGATCTTCCTGAATTTAACAGCGCTTTACTCATCTTAGGGTAT
CTTTCTCTTGGACTTGTCCCTGTATTTTCGCAGTTATCATACTTGAGGTAATCAATCCCC
TGTCGAATACATGATAACGAAAACGCACAGCTTCTAGGTTCAGGAAATGAGTTCAGACAT
AACACATACAAATATACATACCCATGAGGCAAATGTCTTGGCATCTTGTTCTTCATGCCC
GAGTGATCCCGGTATGGTTTGGCTGCAGGTAAAGTCCTATGGATCCCCCCNNTATATNGG
GGAGAAAATTGAAAGTTTAGGCATATCATTAGAGAATCAAAACGAGCTTTCAAACGAATG
ACATAGGGTGAAAAATGTCAACAGGGTTAAAGTAACAGTAAGCTTATCAAATCAAAAGCT
AACTGTGTCGCAAGACCTGTAGGAGATTCACTTTCTTGCCATGGTAAAACGAAGTAACCA
GAAACAGAATTTTGATTACCAGATACCACAGGGCATTG
GenBank Accession BX535312 [GenBank]
Graphic View Graphic view of gene At5g08370
Predicted Position of Insertion Chr5:2692130 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F8L15
Hit Gene Code At5g08370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha-galactosidase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37