SimpleSearch - Line and FST details


Line specific information

 
Line ID 521B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N449943)
Segregation Analysis 50:33:23
Confirmed for Hit At2g41850
Parent of DUPLO pair none
Parent of pair(s) 3294, 3340

Gene hit At2g41850

 
Sequence (A. th genome BLAST matches underlined) 
>82-K020205-022-521-B11-8409
GAAGCTGCAACTCACCGATGAGATCCTCCATATTCTCTGTGGGATCCTCCCTATAGTGAG
AGTTTTCTTTATTTTGTCCGTGACTTAAAAAAGTTGCTTGCTTACCAAGAGAGATGGATT
TTAAGGCTATATATAATAATTTACGGAGATTGATCTAACGGGAGTTTTAACACCTGTTTT
TTCCAACCTCCCNGCGAGGATTGCATATCNNTTGATTTTTTTTCCCCCCC
GenBank Accession BX535770 [GenBank]
Graphic View Graphic view of gene At2g41850
Predicted Position of Insertion Chr2:17463102 - go to primer design
BLAST e Value 6e-54
Hit Clone Code (BAC ID) T11A7
Hit Gene Code At2g41850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation polygalacturonase ADPG2-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g22200

 
Sequence (A. th genome BLAST matches underlined) 
>82-K020048-022-521-B11-8409
AACCATTTACATTGAATACTTAGAGACCCTAGCGAAATTGACATGTCTACATGTGCTTTG
GACCTATGGGATCCTCCCTATAGTGAGAACCTCTACCATTTATTGCGCTAACTTTTTAGA
ATCCATCTTTAAATATTGACTTGTTATCCAACCAATGCGATCACCCCATCATGGATTCTA
GCACCCTCGTAGGCTATAGGACCGCCTTCGACTAATAGCTGAAGTTGCAATTAGCCTATG
AGATCCTCCATATACCCTGTGGGATCCTCCCTATAGTGAGANNNN
GenBank Accession FR811590 [GenBank]
Graphic View Graphic view of gene At2g22200
Predicted Position of Insertion Chr2:9444528 - go to primer design
BLAST e Value 3e-05
Hit Clone Code (BAC ID) T26C19
Hit Gene Code At2g22200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Integrase-type DNA-binding superfamily protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37