SimpleSearch - Line and FST details
Line specific information
| Line ID | 522B11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N450039) |
| Segregation Analysis | 47:47:45 |
| Confirmed for Hit | At3g26910 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4458, 4545, 4567, 4587, 7331, 59944, 93018 |
Gene hit At3g26910
| Sequence (A. th genome BLAST matches underlined) | >82-K020049-022-522-B11-8409 ATCAGCGTTTTGAGTCAAACGTGACGCAGACGCGGAAGCCTCTTCGTTCGATCAGCTTTC CTACTCCTGCATGATTAATAACCTATGGAGGTTTCCCTAAATCCACAGCATACAAATTCC ATTTATGAATCATGCAATTACATTTTAAAAATACTTCGTGCATTTACATTTTCGAGTCGT TTGCGTTTGCGTGTAGATTGAAAGTGTCATTCTAAACGCCAAACGCAAACGAAAGTTAAA CAAGAACATTTCATTTGTGTTTTATGGAAAACTGAACATGCTTTTATGTTTCAAAAATAT CATTCTTTTTCTGTAAGATTATTTCACGTAAACGCATAAAATGAGTTTGAAAGAATCGAT TATACCTCTGATTTGACTGGTCTGAGCAACTCCTGTGGCTTGAGGAAGTGGCCTATGGGA TCCTCCTAATTAGTGAG |
| GenBank Accession | BX535908 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:9915227 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MDJ14 |
| Hit Gene Code | At3g26910 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hydroxyproline-rich glycoprotein family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At4g26390
| Sequence (A. th genome BLAST matches underlined) | >82-K020204-022-522-B11-8409 CTTATGCTTTCCTTTCCTTTTTACGTTTTCTTTCCCTGTTAATTTCGATTCCTCAAATAT ACATTTTTCAAAATGGGATAATTAATTATGGAATTAACTTGGGTAATTCTTTGTCCATTT CCATTTTCGGGATGGAAGGGCTCCCCAAGTCGATTTTAAAAGTCCTTAAAAACGCTAATG CCTAATGGAAATGTTGCCCTCAATGTAAAGGTGTTTTTTTTGGTTAAAGGGGAATTCCTA TTTTGATGGAACCCTCCCTTTGTTGGGCTGACAAAGGATTTCATATGTGTGGAAGCAATG AGTTTGCTTGACTATGTTAACCTTTTCATTAGGATGATGTTTCCCGCTGCGGTGCCTATA AGAACGATGGAGTCGCTTGCTTCCTCTGCGGTAAGAACCGCTACTTCCTCAAGAGCCACT |
| GenBank Accession | BX535909 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:13343575 - go to primer design |
| BLAST e Value | 7e-20 |
| Hit Clone Code (BAC ID) | T25K17 |
| Hit Gene Code | At4g26390 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Pyruvate kinase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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