SimpleSearch - Line and FST details


Line specific information

 
Line ID 522D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N450054)
Segregation Analysis 50:47:44
Confirmed for Hit At4g10960
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g10960

 
Sequence (A. th genome BLAST matches underlined) 
>12-K020204-022-522-D02-8409
ATGACTCGTACCTTACTAATGCGAATAGACATCATACTTCTGAGTACTTATGAGTCCTAT
TATGAATCCTTTGTAAGGATCGTAAAAATCATAACTTTACCGGATTGATGATGGATATTG
AATCGATGAAACTCTATACTATCATCAATCTTTCTATGGGATCCTCCCTATAGAGAGACT
AGCACTCTTTCGCTAGAGATCACAAAGCAATCTAAAAACATTTCTCTTGATCTTTTTCCT
TTACCAAAAAACAAAGATCCTTTCTTCTGTTTCGTAATGATGGCTATGGGATCCTCCCTA
TAGTGAG
GenBank Accession BX535932 [GenBank]
Graphic View Graphic view of gene At4g10960
Predicted Position of Insertion Chr4:6718818 - go to primer design
BLAST e Value 6e-51
Hit Clone Code (BAC ID) F25I24
Hit Gene Code At4g10960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences

Gene hit At1g60440

 
Sequence (A. th genome BLAST matches underlined) 
>12-K020049-022-522-D02-8409
CCTATCGTGAAGAGATCACAAGAACTCTAGTTTTCTCGAAATCAGTAAGCTAATGACTCA
TACATTACTACTGCAAATAGACATAATACTTCTGAGTACATATGAATCCGATTATGAATC
AGAGGTTAGGATCATAAAAATCAAAACTTTACCGGAATGATGAAGGATATTGAATCGAAT
AAACTCCAAACAATCATCAATCTTCCTATGGGATCCTCCCTATAGTGAGANNNNNNNNNT
GenBank Accession BX535931 [GenBank]
Graphic View Graphic view of gene At1g60440
Predicted Position of Insertion Chr1:22268585 - go to primer design
BLAST e Value 2e-96
Hit Clone Code (BAC ID) T13D8
Hit Gene Code At1g60440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pantothenate kinase 1
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37