SimpleSearch - Line and FST details


Line specific information

 
Line ID 523F01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12703

Gene hit At5g50540

 
Sequence (A. th genome BLAST matches underlined) 
>06-K020207-022-523-F01-8409
GTATATTCGTGGTTAACATATTGGCAAAATGAAAAAAAGTTCCACCACGGATTCTTTTTT
TTTTTTTTTTTTTTATAATTCATTTTTTTATTATTCCCCCTTGGCCTTTTTTTTCCCCCC
CTTTTTTTTTTTTTTTTCCCAAATTTTTTTTTTTTTTTTCCCCAAAAAAAAAAAAATTTC
CTTTTCTTTCAAACTCTTTTTCAAATGGGCCCCCATTTTGGTATCCCCCCCATTTAGGGG
ATCCTCCCTATAGTGAGCCC
GenBank Accession BX536102 [GenBank]
Graphic View Graphic view of gene At5g50540
Predicted Position of Insertion Chr5:20575432 - go to primer design
BLAST e Value 4e-15
Hit Clone Code (BAC ID) MBA10
Hit Gene Code At5g50540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g64920

 
Sequence (A. th genome BLAST matches underlined) 
>06-K020210-022-523-F01-8409
TAACAAATCGGCATAATGAAAAAAAGTTCCACCACGGATTCTTTTTTTTTTTTTTTTTTT
AACAAATACAAATAATTTTATCCTGCCTGGGCCTTTTTTTTCCCCCCCTTTTTTTTTTTT
TTTTCCAAAATTTTTTTTTATTTTTTCCCAAAAAAAAAAAAAATTCCCTTTTCTTTCAAA
TTGTTTTTTAAATGGGCCCCCCATAAGGGATCCCCCCTAAAAGGGGGCTNCTGCTTCTTC
TTCCCCTTCGGGTTCTCCCCACTGAAGAGAATTAAATGCCCCCATTTGTTATTACTTATG
TTGTTACTCTTTCTCTTAAGATTAATCTTTGCTTAGTCTCTCAACACTATTTGGTTGGCT
GCATGTTGCATCAAAGAAGCGAGAAAACATAGAGCGATTTCCCCCACCCCCCCCCAAAAA
AAAATTTTTATTTTTAAAAACC
GenBank Accession BX536103 [GenBank]
Graphic View Graphic view of gene At5g64920
Predicted Position of Insertion Chr5:25944683 - go to primer design
BLAST e Value 1e-49
Hit Clone Code (BAC ID) MXK3
Hit Gene Code At5g64920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation COP1-interacting protein 8
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37