SimpleSearch - Line and FST details


Line specific information

 
Line ID 541F02
Vector Used pAC161
Line Availability available as T3 set from NASC (N451902)
Segregation Analysis 50:27:16
Confirmed for Hit At1g53450
Parent of DUPLO pair 12438
Parent of pair(s) none

Gene hit At1g53450

 
Sequence (A. th genome BLAST matches underlined) 
>14-K023956-022-541-F02-8409
GNAGCCATTTACAATTGAATATATCCTGTACCGCTTCTTCCGAAGGTTGCCTGTACCGTT
CCGACACGATGAGAACGTGTTTGTTTCCACTGAGAGAGATACTGTCACGAGGAGCCCTAG
GGCTTATGTAGACCCAAAGGAGAACTCAGCGTTTTCTAAGACAGATACTGCTTCCTCTGG
TACTGTGTATGAGGAGAAAGTTACAGAATTCGATTTAAGGACTATTGGATTACATACGAT
AGCAAAGGTACTTGTTGTAGTTCTGCAATTTCAAGTTTTTATTTTGCTTCTTACCGCCGA
GATATCTATGGGATCCTCCCTATCGTGAGTGAGAAAAANAAACATTATTTTGCCCTTTTT
TTTCTTCTCTTCAAAGAGGAAGATGTCCGCAGCGTTATTATATGAGGAAAGTACTTTTTG
GAACAACGACAAATTACGACCCCGTCGTATTTATAGGCGAACGCATTAAACAATTTATTC
TTATTCGGAATTCTTTATTTCGACGTGCCAACTTTCCCGTCCAATGGGGGCTTTAAAGAA
A
GenBank Accession BX891378 [GenBank]
Graphic View Graphic view of gene At1g53450
Predicted Position of Insertion Chr1:19953551 - go to primer design
BLAST e Value 4e-132
Hit Clone Code (BAC ID) T3F20
Hit Gene Code At1g53450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation epstein-barr nuclear antigen
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX891377 [GenBank]


Last Updated on 10.06.2021 13:37