SimpleSearch - Line and FST details


Line specific information

 
Line ID 543A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N452035)
Segregation Analysis 50:48:32
Confirmed for Hit At3g49970
Parent of DUPLO pair none
Parent of pair(s) 97498

Gene hit At3g49970

 
Sequence (A. th genome BLAST matches underlined) 
>17-K021955-022-543-A03-8409
GNAGCCATTTACAATTGAATATGAACAAACGAAATTTCTCCAACATGAACAGTGACGTCT
CTATGGGGATCCTCCCTATAGTGAGATCATATTAGGCAGGGTGCCTATTGAGTACTTGGT
GTGGGATGTGTATGGACTTTTGGCTTCTGATTTCGGTGAGGACTCCGACATTAGTCATAA
TCCCGGATTTTCCGTGGAGGTGCAGATTGGATTGGGGGTGGTCATCTTATTCTGCTACGA
CCTACTCTTCTAGATATACACTGAGAACATTGCGATGCTACTATGTGCACCATAGTATCT
ATAGATGACCAAGGAAGGCTCTGTTGAAAACCTATGGAATCCTCCCTATGGTGAGTA
GenBank Accession BX650054 [GenBank]
Graphic View Graphic view of gene At3g49970
Predicted Position of Insertion Chr3:18529018 - go to primer design
BLAST e Value 2e-23
Hit Clone Code (BAC ID) F3A4
Hit Gene Code At3g49970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phototropic-responsive NPH3 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX650055 [GenBank] BX650054 [GenBank]


Last Updated on 10.06.2021 13:37