SimpleSearch - Line and FST details


Line specific information

 
Line ID 550B12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F17N18

 
Sequence (A. th genome BLAST matches underlined) 
>90-K020728-022-550-B12-8409
GATTTATGAATCATCTTCATCGGTTAACACCCCTATATAACTTAAAAAATAGAATTTTAG
AATACGTTATAGTGACTTCTACGCTATGGGATCCTCCCCATAATCAGAGTGACGCATGTT
TATGCATTTATATACAACAGAGAAGCGAAAATATGGCATAGAGACCAGTGATAATTGGAA
GTCTAGGTCATCTTCAGCATAAGTCTTTCAATTGCATTAAATAAGTCACTATGTGATCGT
CCCTATCATTGAGAGAGGACAAGTCAATTTAGCGCAGACACGACGAAGACGGTAGAGCAG
GTGCGAAAACGAAAATGATCTGGTAAATCTTGAACTGGGCTGGTGATGGGACTAATATGC
GCAGATATGAGATCGGGGATTACGCTTATATGAATGTATCAACGCAAACCTCATGTGGGG
CAGAATACGAGGAAGAGAGCACTAGGATAAGTGGTCATGTTGACATGAAGGGAATAAGAG
CTAGTAATATAAA
GenBank Accession BX572426 [GenBank]
Graphic View Graphic view of sequence BX572426 of line 550B12
Predicted Position of Insertion Chr4:7667600 - go to primer design
BLAST e Value 6e-14
Hit Clone Code (BAC ID) F17N18
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g02570

 
Sequence (A. th genome BLAST matches underlined) 
>90-K023855-022-550-B12-8409
CCAAATCACACCCAGACTATCGGATTGTGCGCCCACGACGGACGTAAGCGTCATACTATA
CTCGGAGAGAACAGTCCATGCATGAGATAAAGACGAAATTACACAGTAGAAACGCAATCC
AGAGACTCCGACGTAACCCTAACAATCTCGATCCCACAAAAATTCAAATAAAAACCTATG
GGATCCTCCCTATAGTGAGTCGTATTACTCACGGGGCTAGACGGAATTGGAAACACACTG
GGTTACCCGCTCTAGGGAGTCCTATGGGTTCTGGCCTTTAGGGAGTTCTTTGTACACTGG
CCTCACAGTAACGTGGGAGATTGCTGGGTAAGGGAATCCGAGGAGGTTTCCGGATATTGA
GCTTTTGGGAATACT
GenBank Accession BX891510 [GenBank]
Graphic View Graphic view of gene At4g02570
Predicted Position of Insertion Chr4:1129118 - go to primer design
BLAST e Value 6e-51
Hit Clone Code (BAC ID) T10P11
Hit Gene Code At4g02570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cullin 1
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37