SimpleSearch - Line and FST details


Line specific information

 
Line ID 551F12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 6772
Note

Gene hit At2g05420

 
Sequence (A. th genome BLAST matches underlined) 
>94-K022077-022-551-F12-8409
TATGGTATAATTCTTAGTATAATCCACATTTGAATGGTATCGTGATTTGGACCTATAAAT
GTTTGCGGATTATTACTATGGGATCCTCCCTATAGTGAGATGTGTCTTGTCCATCCAATA
GGGAAAGATTTACTATTAGCAACGTTTAAATACAGAGCCAAATTATTAGCCCTATAAGCC
AAATAAGTCGCCTTTTCATTTCCCTTGGGATAGGCCTTAAGACGCCTGCAAGCAAAAACC
AAAGTAAAATAATCAGCTAAACCCATATCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX650679 [GenBank]
Graphic View Graphic view of gene At2g05420
Predicted Position of Insertion Chr2:1984357 - go to primer design
BLAST e Value 3e-90
Hit Clone Code (BAC ID) F16J10
Hit Gene Code At2g05420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAF-like family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 650H12

Gene hit At2g46210

 
Sequence (A. th genome BLAST matches underlined) 
>94-K022302-022-554-F12-8409
TATAAGGAAGAGAAGGCGTGATAATCGATTCCGAATCTGGGATTTACCATTCAGTAAAGA
GAAAGGTGCTGAATTTGCAACCTATCCTCGTGGTGTGTTCTGTGTATTGCCTCGAATTTG
GGAACCGCCGAATAGAGAAAGCTTCCACTGACATTTGACGACGTTAACTGGGGGGGGGGG
GGGGGGTTT
GenBank Accession FR812141 [GenBank]
Graphic View Graphic view of gene At2g46210
Predicted Position of Insertion Chr2:18977387 - go to primer design
BLAST e Value 2e-06
Hit Clone Code (BAC ID) T3F17
Hit Gene Code At2g46210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Fatty acid/sphingolipid desaturase
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit FR812141 [GenBank]


Last Updated on 10.06.2021 13:37