SimpleSearch - Line and FST details
Line specific information
| Line ID | 554F10 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6845 |
| Note |
Gene hit At2g23096
| Sequence (A. th genome BLAST matches underlined) | >78-K021826-022-554-F10-8409 AGCCATTTACACTGATAGTTAAACCGAAGGCGGGAAACGACAATCTGATCCCCGGGTACC CTGTCCTCTCCAAATGAAATGAACTTCCTTATATAGAGGAAGGGTCTTGCGAAGGATAGT GGGATTGTGCGTCATCCCTTACGTCAGTGGAGATATCACATCAATCCACTTGCTTTGAAG ACGTGGTTGGAACGTCTTCTTTTTCCACGATGCTCCTCGTGGGTGGGGGTCCATCTTTGG GACCACTGTCGGCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATT TGTAGGAGCCACCTTCCTTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAAT GGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGT CTTCTGAGACTGTATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGT TGACGAAGATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCG |
| GenBank Accession | FR812204 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:9835796 - go to primer design |
| BLAST e Value | 0.83 |
| Hit Clone Code (BAC ID) | F21P24 |
| Hit Gene Code | At2g23096 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit K13N2
| Sequence (A. th genome BLAST matches underlined) | >78-K022312-022-554-F10-8409 AATCTGACCCCCGGAAACCCTGACCTCTCCAAATGACCTGAAATTCCTTATATAAAGGAA GGTTCTTGGGATATATCTTCTCCATATCATATATCTTGATATGTGTACCATTAAGTTATA TCTTTGACCGGCATATGCATTGGCAGGCCATTATACTGGGATCCTGCCTAGACCGACTCG TATTAATCCGCAATTATGAAACCCCTACTT |
| GenBank Accession | BX651029 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:9412120 - go to primer design |
| BLAST e Value | 2e-20 |
| Hit Clone Code (BAC ID) | K13N2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR812205 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
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