SimpleSearch - Line and FST details


Line specific information

 
Line ID 563B11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 1598, 3058
Note

Gene hit At2g02180

 
Sequence (A. th genome BLAST matches underlined) 
>82-K021120-022-563-B11-8409
AGCCATTTACATGTAAAACAAAATTACATGTCGCGCTGAGTAAATACCTGTTTTTTTTTC
TAAGAAGACAAGACTATGGGATCCTCCCTATAGTGAGGCTATGGGATCCTCCCTATAGTG
GGCTACACTGAATTGGTAGCTCCAAGGGACCCTTTTAATGTAGAGGAAAGTGGATTTTCC
CCTTATCTTTCCCCCATCTGGACAGGGAAGGGCTTTGCGGAAACGTGTAAATTTCCCGGA
CATGAAGCCGTTT
GenBank Accession BX651737 [GenBank]
Graphic View Graphic view of gene At2g02180
Predicted Position of Insertion Chr2:562957 - go to primer design
BLAST e Value 0.83
Hit Clone Code (BAC ID) F5O4
Hit Gene Code At2g02180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tobamovirus multiplication protein 3
Insertion Classification CDSi
Confirmation Status failed

Gene hit T18A10

 
Sequence (A. th genome BLAST matches underlined) 
>82-K022810-022-563-B11-8409
CATGTAATAACAAAATTACATGTCGGCTGAGTAATACTGTTTTTTTTTCCAAGAAGACAA
GACTATGGGACCCTCCCATAGGGAGTCGCATACTCACGGGGTCCCCGGAATGGGAACCCC
ACGGGGCCCCCCCCAATGGGG
GenBank Accession BX651738 [GenBank]
Graphic View Graphic view of sequence BX651738 of line 563B11
Predicted Position of Insertion Chr4:370256 - go to primer design
BLAST e Value 6e-08
Hit Clone Code (BAC ID) T18A10
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37