SimpleSearch - Line and FST details


Line specific information

 
Line ID 563D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N453997)
Segregation Analysis 50:19:11
Confirmed for Hit At1g36000
Parent of DUPLO pair none
Parent of pair(s) 740, 72877

Gene hit At1g36000

 
Sequence (A. th genome BLAST matches underlined) 
>68-K021120-022-563-D09-8409
AGCCATTTACATTGATCATATATTGACTTTGCCTAAAGTTAAAAGAAATTAATATCAACT
AAAACATTTAGCAAAAGAGAATAATAAGCAAAAAAAGTAAAAATAAATAAATAAATATAC
AATTCATATGGAAAGTATTCTGCATATTCGCAGAATCTGGGACAATTTCTGTTTTTGGTG
ATACATACGGAGCAAGGACGACGGTTTCCTATGGGATCCTCCCTATAGTGAGACTATGGG
ATCCTCCCTATAGTGAGGCTATGGTATCCTCCCTATGGTGGGCTACGCTGAATTGGTAGC
TCACGCTGGCAGTATTTTTGTATA
GenBank Accession BX651770 [GenBank]
Graphic View Graphic view of gene At1g36000
Predicted Position of Insertion Chr1:13422762 - go to primer design
BLAST e Value 4e-46
Hit Clone Code (BAC ID) T22A15
Hit Gene Code At1g36000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LOB domain-containing protein 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX651770 [GenBank]


Last Updated on 10.06.2021 13:37