SimpleSearch - Line and FST details


Line specific information

 
Line ID 564C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N454073)
Segregation Analysis 50:48:41
Confirmed for Hit At2g18790
Parent of DUPLO pair none
Parent of pair(s) 3903, 3912, 3922, 3988

Gene hit At2g18790

 
Sequence (A. th genome BLAST matches underlined) 
>03-K023154-022-564-C01-8409
ACAATTTACAATTGAATATATCCTGGACTATGGGATCCTCCCTATAATGAGCCGGCATCC
ACAGTGAATATAGGAACACGTTGCAGCCCCTCGAAACCTAAACTTTTCGCTCGCCGGTGC
CATCAAACTCATCATATCCCCCTGATCCCCCGACTGTATCCCTACCTGGCTGAGCCACAC
CATCCACAACTTTACAGTTCATGGGGGGGGGGGGGGCTTTAAAA
GenBank Accession BX891739 [GenBank]
Graphic View Graphic view of gene At2g18790
Predicted Position of Insertion Chr2:8142118 - go to primer design
BLAST e Value 3e-10
Hit Clone Code (BAC ID) MSF3
Hit Gene Code At2g18790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phytochrome B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX891739 [GenBank]


Last Updated on 10.06.2021 13:37