SimpleSearch - Line and FST details


Line specific information

 
Line ID 568A01
Vector Used pADIS1
Line Availability available as T3 set from NASC (N454433)
Segregation Analysis 50:42:41
Confirmed for Hit At1g66440
Parent of DUPLO pair none
Parent of pair(s) 11262, 85278, 85281, 85284

Gene hit At3g23510

 
Sequence (A. th genome BLAST matches underlined) 
>01-K021288-022-568-A01-8409
GAAGCCATTTACATTGAATATATCCCGTGCAATCGGTAATAGAATATTATGTGAATCCGC
TACCCCATTTTTCACTATAGAAAACAAGTAAAGCTTGTGGCTGTTCAAACTCCGTAAACG
TGAGTGGAAAGCACCAAGAACCCTAGATTCGTCAAATGTAACTTCTTCACCAAGCAATCT
CAGAGCATCTGTGGGCGTGCATAGCCAATATGCACCTATCGAATACTTCTTCAGACCCAT
CTCCACTTGTAACAGTTACACAACCATTTTCGGATGTCGAAACAGATTTTACGTCGCAGC
TTGTTCTGATCTTGCATCCTAGTCTCTCCAATTCTGCCCTAACCTGATCCGTAGTTAACC
ATAAGTCAGGGTCAAATGCATATATGCCTTACACAACACAACCAGATGTATGGGATCCTC
CTAATAGTGAGAAACTTTGCGACGTAAATCTGAGAAAGTCCTGCAACAGTTAGCCTCTGT
GGCCTCCCAAATATCTGAACAAGAGACTAGAATAAGCTTATAATCACCGATAGAAAGGA
GenBank Accession BX652280 [GenBank]
Graphic View Graphic view of gene At3g23510
Predicted Position of Insertion Chr3:8430053 - go to primer design
BLAST e Value 3e-176
Hit Clone Code (BAC ID) MEE5
Hit Gene Code At3g23510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cyclopropane-fatty-acyl-phospholipid synthase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g66440

 
Sequence (A. th genome BLAST matches underlined) 
>01-K021348-022-568-A01-8409
NAGCCATTTACAATTGAATATATCCTGCTTGAATGTGCATGCGTTGAACAGCTTATTCTC
TTCTTAGTCTCTGCCCGGGTTATCTTCCTGTCTCAAATAATGTTGTTGATGGCTGAAATG
TTGTATGATTCCGAGACTTATCCTCACAAATGGATTAACTCCTATTTCATCAATAGCTTG
TGGTTTTCCCTTAAGATCTTCATTATCTCCAAACATTACTCTGAGTGGCACATTTGGAAT
GACCCACATACGTATGGGATCCTCCTTATAATGAGATAGTTCATGGAAGTCATATGCATC
CTTTATTCCTAACATCTAAACCAGGACATTGGAGAACATGTACTGTTTGCAAAGAGTCAA
GCCGTTATGTCACACATGAAACATTTAATTGCGTTCAATGTGTCTTTGCTTTGTGTTTCA
AGTGTGCTGCTATACCTCAGAAGGTGAGGTATAAGCATGATAATCATGTGCTCATTCTTT
CTTATGGGAAGGAGATCGAGACAAGTATGGGATCCTCCCTATAGTGA
GenBank Accession BX652281 [GenBank]
Graphic View Graphic view of gene At1g66440
Predicted Position of Insertion Chr1:24783560 - go to primer design
BLAST e Value 9e-121
Hit Clone Code (BAC ID) T27F4
Hit Gene Code At1g66440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37