SimpleSearch - Line and FST details


Line specific information

 
Line ID 569E04
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 11106

Gene hit At4g00780

 
Sequence (A. th genome BLAST matches underlined) 
>29-K020969-022-569-E04-8409
TTCACGCTGCGGGTATTGGATCACATTAGCTGGAATCATGTTGAGGAATCAGGTATATAT
ATAGGATCCATCTTTATTACGAGGAATTTGTTTTGGAAATTTACTCTTGTGATGGTAAAA
TACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACGGNNTCCNACNTNNNNTGNGC
CNCCCTGNCTTGCTATCTCCAATTTCCCATTTCCNNANATATGNTTTTTTNTTTNCTCCN
AGNGGAGGACCNTTCCCACTTANAAATGGTCGAAACCTATTTCAACATCNAAATGGACAG
AGATTAAGCCAAAC
GenBank Accession BX572566 [GenBank]
Graphic View Graphic view of gene At4g00780
Predicted Position of Insertion Chr4:335660 - go to primer design
BLAST e Value 1e-52
Hit Clone Code (BAC ID) T18A10
Hit Gene Code At4g00780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAF-like family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g13110

 
Sequence (A. th genome BLAST matches underlined) 
>29-K021210-022-569-E04-8409
TCAATTGGAAACTTGCGAATTGATTCATGTATTTTTATGCGGAAAAATCCCCATTTTTGC
TCTTTTAGACCAATCACTTACGTGTGTGACCGGTTCCCAATGTACGGCTTTGGGTTCCCA
ATGTACGGGTTCCGGTTCCCAATGTAAGGCTTTGGGTTCCCAATGTCACTGCTATCCACA
TGAAAAAGACCTTTTCGACCTTTTTCCCCTGCTATGGAATCCTCCCTATAGTGAGACTGA
CTTCTTTCCCACCGGTTAACGGTGACCGACCTCGATACACTCTCGTTCAAGTCTGCTTCT
CCTAAAAAACGAAAGTACCTTTCGATAAAAGGACAAATTACGATCCGTCGTATTTATAGG
CGAAAGCAATAAACAAATTATTCAAATTCGGAAATCTTTATTTCGACGTGTCGACATTCA
CGTCCAAATGGGGGCTTAAATGAAAAACTTCACGATCGATGCCTTGATTTCGCCATTCCC
AGATACCCATTTCATCTTCAGATTGGTCTGAGATTATGCGAAAATATACACTCATAT
GenBank Accession FR812443 [GenBank]
Graphic View Graphic view of gene At5g13110
Predicted Position of Insertion Chr5:4158792 - go to primer design
BLAST e Value 3e-13
Hit Clone Code (BAC ID) T19L5
Hit Gene Code At5g13110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucose-6-phosphate dehydrogenase 2
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37