SimpleSearch - Line and FST details


Line specific information

 
Line ID 571E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N454770)
Segregation Analysis 50:49:38
Confirmed for Hit At2g17290
Parent of DUPLO pair none
Parent of pair(s) 5262, 5266, 5295, 5332, 5356, 8638, 8650, 81962, 81989, 82019, 82094, 82206, 82222, 82239, 82255, 82285, 82301, 82303, 82304, 82306, 82307, 82309, 82311, 82312, 82313

Gene hit At2g17290

 
Sequence (A. th genome BLAST matches underlined) 
>13-K021196-022-571-E02-8409
TGGGATCCTCCCTATAGTGAGACTATGGGATCCTCCCTATAGTGAGAGCTATGGGATCCT
CCCTATAGTGGGCTACTCTCAATTGGTAACTCCAGTTTATACGTCCCTGTATACACGCCA
TGGAATCCCCCCTATAATGAAACAGCTTGCCTCTCGCTGTAATGACCTCTATGAATAATC
CTATCAAACAACTCACCACCACCACAAAGCTCCATCACAATGTGAACATACAAAGGATCC
TCATAAGCTCCTTTAATAGTAACAATATTCTTGTGACCAGCTAAATGATGCATAATCTGA
ATCTCCCTCCTAACATCCTCAACATCTTCTTTAGATATCAATTTCCTCTTGGATATAGAC
TTACAAGCATAGTCAACACCTGTGGCAATATCAGTACACAAATACGTTGTCCCGAATTGT
CCTTGTCCTAACTTACGACTCAACGTGTAAAGATCACGAATGTTAGGAGTCTTGTGACCA
AGAACATAGTAAGATTGATTGTCAACGTTACGCCGC
GenBank Accession BX652631 [GenBank]
Graphic View Graphic view of gene At2g17290
Predicted Position of Insertion Chr2:7517692 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F5J6
Hit Gene Code At2g17290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g00780

 
Sequence (A. th genome BLAST matches underlined) 
>13-K023195-022-571-E02-8409
GGCTTGTTATGGTAACAGGAAACTCTCTGTGTACCCAAATGGGCATAAGAATGCTAAGGG
GACTCCTGTCTCCATGTTCTTACTGAATCAAGTTCCGGCCAATGATATGCCTACTTATGA
GCTCCCATGGGATCCTCCCTATAAT
GenBank Accession BX891909 [GenBank]
Graphic View Graphic view of gene At4g00780
Predicted Position of Insertion Chr4:335101 - go to primer design
BLAST e Value 1e-52
Hit Clone Code (BAC ID) T18A10
Hit Gene Code At4g00780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAF-like family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37