SimpleSearch - Line and FST details


Line specific information

 
Line ID 573H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N454999)
Segregation Analysis 50:36:23
Confirmed for Hit At5g23000
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g23000

 
Sequence (A. th genome BLAST matches underlined) 
>72-K021153-022-573-H09-8409
TACATTGAAATATCCTGACATGAAGCCATGTACATGTAGATTATGTTTGGTCTAAAAATC
TTCCCATTTCTCCTCAAACCTTATACCACAACAAAGAAGGGCATAAGTCTCTTATTTGGG
CTTAGAAGCTCGAAAAGGTTATCTATGGGATCCTCCCGATAATGAGACGTATTTTTCCCC
CCCACTTGCCGGTGAAGGCCCTTTCATACTTATCTGCTTACATAGGTTTAAAGAAAATAT
TAATTCACACTCTCCTTCAATTAATCTTATAATAGTAACACAATTTCTCCTAAATCTAAT
TTTGAATTTATGTGTTATTTTGAAGTAATGATCAAAATATTTCCAAACGTGCTTAATTTC
TTCATAAATCTATGGGATCCTCCCTATAGTGAGACTTATTGACCCCTCCCCAAAGACCCA
TTTCTTCTTCTGATTGGTCTGAGATTATGCTAAAATTTACACTCAAAATG
GenBank Accession BX652897 [GenBank]
Graphic View Graphic view of gene At5g23000
Predicted Position of Insertion Chr5:7696513 - go to primer design
BLAST e Value 3e-93
Hit Clone Code (BAC ID) MRN17
Hit Gene Code At5g23000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 37
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g04570

 
Sequence (A. th genome BLAST matches underlined) 
>72-K021155-022-574-H09-8409
AAAAGAGAGGCCCTCTAATCTCTTATTTGGGCCAAGAAATCCCATAAGGTTATTTATGGC
CTCCTCCCCAAACTGTGTGGGACACCTCATCAGTCTCTTCACAATTCATTTCCCAAAAAC
TATGTCTTCAACCGTAACATTTGCCGGTAAAATACCCGCGATCATCGTGTTTGGCGACTC
TTCCGTTGATGCCGAGAACAACGACTATATCCCAACTGTTGCTATGGAATCCTCCCTATA
TTGAGACG
GenBank Accession BX653013 [GenBank]
Graphic View Graphic view of gene At2g04570
Predicted Position of Insertion Chr2:1594606 - go to primer design
BLAST e Value 1e-58
Hit Clone Code (BAC ID) T1O3
Hit Gene Code At2g04570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-like Lipase/Acylhydrolase superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37