SimpleSearch - Line and FST details
Line specific information
| Line ID | 574E02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N455058) |
| Segregation Analysis | 50:45:44 |
| Confirmed for Hit | At3g02160 |
| Parent of DUPLO pair | 11896 |
| Parent of pair(s) | 11987 |
| Note |
Gene hit At3g02160
| Sequence (A. th genome BLAST matches underlined) | >13-K021121-022-574-E02-8409 CCGGACATCAGCCATTTACATTGAATATATCCTGATTACTAATTGAACACTTTCCTTGTT TGGCTTCCTGCATTTCCCGATTTCGAATTGTGTGATCGAGCTTAGGAGACTATGGCAGCC ACTCTCTGAGGACATCTTCCTATGGGATCCTCCCTATAGTGAGACTAAGGGATCCTCCCT ATAGTGGGACACCCTGAATTTCCAAGTGGGGGGGGGCATTTTTTTTTTTACCAATTTTGA TTTTCCCATTATCTCAGAACAGTCTTAATAGGAAATGGGTAACCGGGAATTGCGAAATCA AGGTTTCCATCGTGAAATTTCCCATCTAATCCCCCCTTTGGACTTGAATTTAAAACCCTC CAAATAAAAATTTCCCAATTATACTTATTTGTTTATTGCCTTCCCCCAA |
| GenBank Accession | FR812546 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:395175 - go to primer design |
| BLAST e Value | 4e-09 |
| Hit Clone Code (BAC ID) | F1C9 |
| Hit Gene Code | At3g02160 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Bromodomain transcription factor |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g01210
| Sequence (A. th genome BLAST matches underlined) | >13-K021152-022-574-E02-8409 AGCCATTTACAATTGAATATATCCTGATACCATTTGATCACATTCTTGTTGGAGCTTCCC GCATTATCTCGATTTCGAATTGAGTAATCGAGATTAAGAGTCTATGGCAGCCACTCTCTA GGGACAATCTTCCATATGGGATCCTCCCTATAGTGAGACTAAGGGATCCTCCCTAAATTG GGACAACCTGAATTTCTAACTTCTGGTGGCCATTATTTGATTTCCCACTATGGATTTGCC CCATTATACACCACCCCGATTTATCCCGCCACGGCATTTTCGAATTTCGGGTTGTTCGTA TAATTCCACTTCGTGGTCCATGAGTCCCCCTTGACGCCGATCATTTTATAAGGGAGAGAA ATATTAATTCCATCATAAAGGCTTTCACGAATTCGAAATTCAGGAAGAATCACTTATTCA ACGGAATGGAGACAGCCTTTCACAATGGAAGGAAATGTAACGGAGAGATCAACGGAAAAA TAACACCCGTTTTGGATAGTTTTTTGAATAATAAAAAGAGTTATGATCGGACGGGTGAGA T |
| GenBank Accession | FR812547 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:84898 - go to primer design |
| BLAST e Value | 2e-41 |
| Hit Clone Code (BAC ID) | F7J8 |
| Hit Gene Code | At5g01210 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | HXXXD-type acyl-transferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
