SimpleSearch - Line and FST details


Line specific information

 
Line ID 576A04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 12292
Parent of pair(s) none
Note

Gene hit At5g65690

 
Sequence (A. th genome BLAST matches underlined) 
>25-K021197-022-576-A04-8409
TGGGATCCTCCCTATAGTGAGACCCTATGATCGTTTTCCTTTTTGGTCGAGCTGATGATA
GCAAGAACTGGTAGTGACGCCTTTGGATGACATGGCAGAGCATCACAGCTCTTTGGGACC
TCTCCTGTGTGATTTGTAAAATTAGTAAACATATATTGGCCGACTATCTTTTTACATTCC
CCATTAATTATTGAAGATAATTTGTGTTTTTTGGAAGTTGATCTATATTCAAATGTAAAT
ATACCGGACGGATTGAATCATGGTCTCGCTGGACACAGGAGTAATCGGACCGCTATGGGA
CCCTCCCTATAGATCAGGTCTGAAACCGGTTGAGGTCTATGGGATCCTCCCTATAGTGAG
A
GenBank Accession BX653098 [GenBank]
Graphic View Graphic view of gene At5g65690
Predicted Position of Insertion Chr5:26267001 - go to primer design
BLAST e Value 1e-61
Hit Clone Code (BAC ID) MPA24
Hit Gene Code At5g65690 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphoenolpyruvate carboxykinase 2
Insertion Classification CDSi
Confirmation Status failed

Gene hit At2g13630

 
Sequence (A. th genome BLAST matches underlined) 
>25-K021255-022-576-A04-8409
GACTTTAAATTGAATATATCCTGAGAGATTGAAGACCTCTATATATTGATTGTTGGATCC
CTGTTGGTTTGCCTTATATATCCGGACTATGGGATCCCTCCCATAATCAAATCTTTACGA
TCGTGATAGATCTCGTATTATGAAAATGTCGAATCCCGTTGATGTCTGCTCTTGCCCAAC
ACCTTGTAAAAACTCTCTGGGTGGATGCGCTCCCGAAATCTATATCACGTTCGTTCGCAC
CGTAATAGACATAGCCCCTGATCCCTACTAAGATTTCCACATCTTGCTTCAATACTAATT
CCTACGACCTACTCCACCCCTCTACGAGAGCAGATGACGTGTATCCTATATCCGAATTCA
TAAGACGATGATTAAAAGACGGATCCTCCTGAGAGCAGGAGTGAAAGAGCTGCCGGCGCA
TGTTACAACGATCGACCGTCAAAAGAA
GenBank Accession BX653099 [GenBank]
Graphic View Graphic view of gene At2g13630
Predicted Position of Insertion Chr2:5685042 - go to primer design
BLAST e Value 3e-25
Hit Clone Code (BAC ID) T10F5
Hit Gene Code At2g13630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box associated ubiquitination effector family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 606E12


Last Updated on 10.06.2021 13:37