SimpleSearch - Line and FST details


Line specific information

 
Line ID 583E04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12362

Gene hit F5O11

 
Sequence (A. th genome BLAST matches underlined) 
>29-K114691-0022-583-E04-8409
TTCGTCATCCTCTAATCTCTATCTCTTTCTTCTGAGCTTACTGATTGTTAACACCTAACC
TGCCTGGCCGCTATATCAAAATGTACTTTCATTTTATAATAACGCTGCGGACATCTACAT
TTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATAC
TCATTGATGTTTCTAAGAAAACAACTGGTTGTTATTATTAGAACTCCTCTGTGTCAGTTC
AAAACTGGATGTTGTCATCCGTTGCTCTCTAAATTATTCTTCTTACAACACTGATTGTTT
AAACTATTTCCGCACAGCTGCTATTAATGAGTCANCNGAAAATGGTCAACACAACACATT
CTCTGCGTTAATGTCTTTCATTGTCTACCTAACCTGCCCGGCCGCTAAAGNNNNANGTGG
GGGTGAATAANTGGTATATTTACTAAGAAAATAAAAATGGTTGGAGATTCTTATATAGTT
GTATG
GenBank Accession HE664772 [GenBank]
Graphic View Graphic view of sequence HE664772 of line 583E04
Predicted Position of Insertion Chr1:4218262 - go to primer design
BLAST e Value 4e-20
Hit Clone Code (BAC ID) F5O11
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g58420

 
Sequence (A. th genome BLAST matches underlined) 
>29-K021755-022-583-E04-8409
TTCGGATCGGATCACTCTTGCAAAACTCAAAACATGGATTCGTCATCCTCTAATCTCTAT
CTCTTTCTTCTGAGCTTAGTGATTGTTTACATCTATGGGATCCTCCCTATAGTGAGACCA
TTTATATCATCGGGTAGAGATTTGTTGTGCGTCAAAAAACAGCCAGCCAGGCCCAAACTC
AAAAAAAGCGTGACCAAACAAAAGATAACTTCAATGACTGAACGGGTTCCGGGATTTATG
GGTATGGTGGGAATTCCTTCGAGCCATCCG
GenBank Accession BX654781 [GenBank]
Graphic View Graphic view of gene At5g58420
Predicted Position of Insertion Chr5:23619565 - go to primer design
BLAST e Value 5e-33
Hit Clone Code (BAC ID) MCK7
Hit Gene Code At5g58420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein S4 (RPS4A) family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit BX654781 [GenBank]


Last Updated on 10.06.2021 13:37