SimpleSearch - Line and FST details


Line specific information

 
Line ID 584G10
Vector Used pAC161
Line Availability available as T3 set from NASC (N456050)
Segregation Analysis 50:41:41
Confirmed for Hit At5g01300
Parent of DUPLO pair none
Parent of pair(s) 8105, 94959

Gene hit At1g67830

 
Sequence (A. th genome BLAST matches underlined) 
>79-K021756-022-584-G10-8409
AGCCATTTACAATTGAAGCGTGAACAAACAACTTGCGTGATAGAGGCATGTAGATGTCTA
CTCTCTCAAGCGGCCTGGCCGGCCAGCTTGGCCGCTGAAGAAACCGAGCGCCGCCGTCTA
AAAAGGTGATGTGTATTTGAGTAAAACAGCTTGCGTCATGCGGTCGCTGCGTATATGATG
CGATGAGTAAATAAACAAATACGCAAGGGGAACGCATGAAGGTTATCGCTGTACTTAACC
AGAAAGGCGGGTCAGGCAAGACGACCATCGCAACCCATCTATGGGATCCTCCCTATAGTG
AGACTAAGTAATCACCCCTTTGTACGTGAATGT
GenBank Accession FR812683 [GenBank]
Graphic View Graphic view of gene At1g67830
Predicted Position of Insertion Chr1:25432007 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) F12A21
Hit Gene Code At1g67830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha-fucosidase 1
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g01300

 
Sequence (A. th genome BLAST matches underlined) 
>79-K021752-022-584-G10-8409
ATTATTATAGGTATTCCGGAAGGGAACCATGATCCCCAGATTCCCGGATGGCGTGGACCT
CCTCTTCCTATGGGATCCTCCCTATAGTGAGTTT
GenBank Accession BX654905 [GenBank]
Graphic View Graphic view of gene At5g01300
Predicted Position of Insertion Chr5:121942 - go to primer design
BLAST e Value 9e-07
Hit Clone Code (BAC ID) F7J8
Hit Gene Code At5g01300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PEBP (phosphatidylethanolamine-binding protein) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37