SimpleSearch - Line and FST details


Line specific information

 
Line ID 586A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N456166)
Segregation Analysis 50:42:41
Confirmed for Hit At5g01410
Parent of DUPLO pair none
Parent of pair(s) 97535, 97536

Gene hit At3g10270

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021758-022-586-A06-8409
AGGGAAGCCGTTATCGAGATGTTTAATTGTTGATAAGAATTCTCAATATGTGAAGTTGCT
ATGGGATCCTCCCTATAGTGAGATTCCGCGCACTTTCCTTTGAACGCCGTTCCTCCCATA
CTTGCCCGCCCCTCTTCCTTCTGTATGCTTTATACGCCCTTTCCTTTAGAATCGACTGAT
TGTCTGACCTCATGTTAGTACCTCCGCATTACAACTATCCGGGTGTCTCTTTGAGACCAC
CTGAATGGCCTCCTGCACGATACCTAAGTAGATGGTGTACTAATATATGTTCGTCATCTG
GCGCTACCGTATGGACCGCTTCCATAGACCATTTTCCCGCTGCCGGATGCGAATCCGCGC
GTATCTGCGAACAGAAAGCTATGTATGAATAAAAGTGACCAAATGCATTTTGATATTAGC
AACAAATTTTACTTCTGGGATGAAAGAAAGCTATATACAAAATAAATAAAAAAAACGTAA
ATGAATAAGATAGAGCATGATTGACATATATTGTTTACTC
GenBank Accession BX655016 [GenBank]
Graphic View Graphic view of gene At3g10270
Predicted Position of Insertion Chr3:3177930 - go to primer design
BLAST e Value 1e-73
Hit Clone Code (BAC ID) F14P13
Hit Gene Code At3g10270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNA gyrase subunit B
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g01410

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021754-022-586-A06-8409
NNNNNGGTAGTATTCGGACATGAGCCATTTACAATTGAATATATCCGGACACCTCAGATA
CCCTCTCAACCAGGCTGCCTTGTGAGAGCTGCAACAGTGGGAGTAACCTCTCCGCCGGCG
GCGAATTGTACTATCGGAAGACGACCAATCTGCTTATACTGCAGCACGAGATCGCACGGA
ACGGCTAATTTCTTACCTAAAGTGAAAACCTCATCATCATCCATGTTTCGCAAAACCCTA
TTGTCACCATTAACATACCTCTGATGCCTCACAGCTTCAATAATGTTACCGGTTCCAGCT
TCACCTTTGGTCCTAATCATCGCCGCACCTTCACGGATCCTCCTCATAGCCTCGCCGAGA
TTCCGGCAACCGCAAACGAACGGGATCCGGAAATTATGCTTGTTGATGTGATGATCTTCA
TCAGCAAGAGTCAAAACCTCGCTCTCATCGATGTAATCGATTCCAATTGCTTCAAGGATC
TGAGCTTCAACGAAATGACCAATCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX655015 [GenBank]
Graphic View Graphic view of gene At5g01410
Predicted Position of Insertion Chr5:172764 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T10O8
Hit Gene Code At5g01410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Aldolase-type TIM barrel family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37