SimpleSearch - Line and FST details
Line specific information
| Line ID | 586G08 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 84878, 84884, 84889, 84894, 84895, 84896, 84897 |
| Note |
Gene hit At1g75090
| Sequence (A. th genome BLAST matches underlined) | >63-K021754-022-586-G08-8409 NNNTTGTAGAATCCGGACATGNACCATTTACAATTGAATATATCCGGACATCTACATTTC AGTTTTTATTTGGTTCCTATGGGATCCTCCCTATAGTGAGACCCCTCACTTCCTTTAACA CTGACTCTCCCCCTTGCTCCAAAATATGCCAATATTAACCCCCTTATCACAATCAAATTC ACCATCACCGACCATTGGATCCTTCCCACAGATGAGCTATAGTCTCTAAGCTTCGTTCTC CGGTTAAACCAATAGATGAGTCACGAGCTATCCTCTGTTCGACCGGGAACAGATTTAAGG TTACGAAAACAGAAATGACGAAGAAGCCACAACTGAATCCACGAGTGACGAAATCTCCGG CGACGAAGAAGCCCGATTCCAATTTCTCAGTTTCGACTGATGATTCCTCTTCTTCTTCTT CATCCTCGGAACGTTCGTCAGTGAACACGACAAACTCTGGGAAAGTAACCACTCCGTCGA AACGGAACGGAGTTGAGAAGCTCAATAATGTCGTTGCCTCCGTCGCCGTCGTTGAAGACA TTACTCCTAAAATTCCGGGACCGG |
| GenBank Accession | BX655111 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28189766 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F9E10 |
| Hit Gene Code | At1g75090 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | DNA glycosylase superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At3g47790
| Sequence (A. th genome BLAST matches underlined) | >63-K021758-022-586-G08-8409 TGAACGAGTTTTGAATTGATTCACATCATCCTTCAACAATTCTTGAAATAACTCTTCAAA TTCCTCTAAACTTTCGTCCCCCTGCTCCAAGATATGCAATTACCATTACCATTAGCATAA TCATATATAATAGTAATGGCTATGGGATCCTCCCTATAGTGAGACGTATTGCGCACATGA CCTGAACCGACTTGGCATCTCCTGGGGATCCACCTGACCAAGGGATTGACATACTAGCCG ATATGGACCGGATATATACAGCAATTGGAGTCTGTCCACAACATGAGTAATCTATAAATA TAACAATCTCTGTTTCTTTCTTTACTTTAAGGCTGCCTTGTTTCTTAGTCCATTACTCCA TTTCATTGAAATTTCTGCAGTCTTCTGTGGGAGAAGTTGAGTGGAAGGGAACATCTACTG TTCTATGGAAGGCTCAAGAATCTCAAAGGTTCTGTCTTAACACAAGTAAGTGTATGTTTT AGCTTTTAGCGTGGT |
| GenBank Accession | BX655112 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:17632327 - go to primer design |
| BLAST e Value | 3e-139 |
| Hit Clone Code (BAC ID) | T23J7 |
| Hit Gene Code | At3g47790 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ABC2 homolog 7 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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