SimpleSearch - Line and FST details


Line specific information

 
Line ID 589D01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 7062, 8204, 8218
Note

Gene hit At2g39390

 
Sequence (A. th genome BLAST matches underlined) 
>04-K021428-022-589-D01-8409
AGTTCGTACGCGCCTTGCTCTCGCATCTAACTACCTACGAGATATCCTTCTCATTTAATT
CACTCGCGATGTTGCGCTCGTTGATTAGTTCCGGGGCCTGTGTTTCTTATGGGATCCTCC
CTATAGAGAGTTAACTTGATAAGCTCTTGTTCTCCATATCCTATTCTACCCCCCAACTCA
ATGTTGCCTGGAGGAAATCATTGGTTATCCCCCCCTCCCATCTGGAACGCGCAGCGACAT
GACTCTCTCTAGCATATTACTCTGCCAGTGGTAAACTCTAAGCAATGTGATTCTTTCTTA
TAAAACTTTTACTTGCGTATGGCATCCTCCCTATCGTGAGAGTAA
GenBank Accession BX655444 [GenBank]
Graphic View Graphic view of gene At2g39390
Predicted Position of Insertion Chr2:16450873 - go to primer design
BLAST e Value 5e-33
Hit Clone Code (BAC ID) F12L6
Hit Gene Code At2g39390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal L29 family protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At4g28950

 
Sequence (A. th genome BLAST matches underlined) 
>04-K021381-022-589-D01-8409
TCCAAAGGAAAGGAGAAAAAACATGAAACTCCCAAGACAAAACACCAAAAACACATAGCT
GGACATCAAAAAAGATGACAAAAGTCGAAACGGTGTCGTCTCTAACAACGGTCGATACGT
GTTTCAACTTAACCGTTGATAAATCCAACTTTTAAATAAAAGAGTGGGTTTTTGTAATTT
CATTTTGCTAATAAGTTTTTTGAAATTTATTGAAAGGGACAATAAAGTTACCCTTTTTAA
AACTTTGACTTGAACGAACCTGAAAATCCGACACATTTAACTCTTTCTCTGTCTCGACTC
TCTAGAAAACACACATTTCAATTTTCTTCTCTTTGGTTTTTGAAAAAATATTTCGAGATT
TACACTCTTTTTGTTGTCGCCCCAGTTGATACTCACTGCAAACGTCTCTTGTAAGCTC
GenBank Accession BX655443 [GenBank]
Graphic View Graphic view of gene At4g28950
Predicted Position of Insertion Chr4:14277700 - go to primer design
BLAST e Value 3e-179
Hit Clone Code (BAC ID) F25O24
Hit Gene Code At4g28950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RHO-related protein from plants 9
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit BX655445 [GenBank] BX655445 [GenBank]


Last Updated on 10.06.2021 13:37