SimpleSearch - Line and FST details
Line specific information
| Line ID | 590F04 |
| Vector Used | pAC161 |
| Line Availability | line died - no seeds available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 1420 |
Gene hit At5g12230
| Sequence (A. th genome BLAST matches underlined) | >30-K021768-022-590-F04-8409 TTTACTTATAGATCCGATTTGGTGTATCGAGATTGGTTATGAAATTCAGATGCTATGGGA TCCTCCCTATAGTGAGACGTATTGCTCGCGTGCATTCCTCAGTGCTTGAGCCTCATGAGT AGTATCCGTTGGAGTTCACACGCCGAACGAGCTGGCACCGATGTTCCTGATCGCCCTTGT TGTTCCTGCCCTATGAGTCTACCACCTCAATCCCTCTCCTTTTTTCACTCTCACAAACTT ACTTCGATCTTCGTCCTTTCTCGTTCACTTGCTAGAATCTCACATTTTAGGCGGGAATTC AAGCCCCAACCCCACGACCCTCCCACTTCCCCCCTCACGTTTCACTGCTTTCATTAGCTA TGGGATCCTCCCTATAATGAGACCTTACAGACACTTTCAACAAAAATGAAAGTGCATTTC GATAAAACGACAAATTACGATCCGTCGTATTTA |
| GenBank Accession | BX653673 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:3956278 - go to primer design |
| BLAST e Value | 1e-18 |
| Hit Clone Code (BAC ID) | MXC9 |
| Hit Gene Code | At5g12230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | mediator of RNA polymerase II transcription subunit 19a-like protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At1g78530
| Sequence (A. th genome BLAST matches underlined) | >30-K021773-022-590-F04-8409 CGGAAAGNAAGCCATTTACAATTTGAATATATCTCTGTTAGAAGCCATATTAGCATTAAT AAGCTTATACAGAGGAAAACTAGATATGATGACATTTATACCCAAGTAACAAGGCTTTGT TCCTTCTTCGAGAAACTCGTCATCCTGTTGGTTTTCTTCCAGTTAAAAGCTCCAACAAAA CAACTCCCAAATTGCAAACATCTCCATTCATTGATCGGTTTTCCAGTACCTAAATACTCT GTTTATAACAAAAACAAACCTGAACAAAATCGAGATGCAATCCAAATTTTGGTTTATATA TTTGAATCTATCAGTTGTGTACCAACCAGGAGCTAAATATCCGAATGTTCCAGCCACAAA AGTCGAAACATGAGTCTTGTCTGGCTCCATCAAAGTGGCTAAACCGAAATCAGAAACCCT ATGGGATCCTCCCTATAGTGAGAACTATGGGATCCTCCCTATAGTGAGANATTCCAACAC ANNCTCAACCTATCGTTGAAGGACCTGGTNCAC |
| GenBank Accession | BX653674 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:29539508 - go to primer design |
| BLAST e Value | 1e-144 |
| Hit Clone Code (BAC ID) | T30F21 |
| Hit Gene Code | At1g78530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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