SimpleSearch - Line and FST details
Line specific information
| Line ID | 594C05 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3617, 3714, 8248 |
| Note |
Gene hit F3L24
| Sequence (A. th genome BLAST matches underlined) | >35-K023193-022-594-C05-8409 ATTTACAAGTGAATATATACTTGTTCGAGAAAGCTAAGCAATTGAATTCCGCAAAGATGT GATTGAATTGCATGGACTTGAACCCATACTATGGGATCCTCCCTATAGTGAGTAATATTA ATCCTCTTTGTACCACCAAAAAGCTCACCAACTGCAATGTATATCTGTGCAACATGAAGG AAACACATGGAATCCGGGGGGGGGGGGGAAACATGAAGCTACCCTCTAATAAATCCACCA AATACCACCCGCCGTACATACACCGTCGCGCAGCCCCCCCGGGAAACGTAGGGAACCCAC AACGAGCACCGAGGGCGGCTTGCAGCTCGGGAAATAGCACTGGCACCACCCGCACCGAGA GGGCCCGCCTAGAGCACCCCGAGAGGAGGACAAACTGAGGGAAC |
| GenBank Accession | BX891975 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:2853799 - go to primer design |
| BLAST e Value | 5e-21 |
| Hit Clone Code (BAC ID) | F3L24 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g52930
| Sequence (A. th genome BLAST matches underlined) | >35-K021859-022-594-C05-8409 NNNTTTAGTGGTATTCGGACATGAGCCTTTACAAGTGAATATATCCTGCATGCATGGATC AGCAAAAGTCTACATGTCCGGATTTTACGTTGGCCCGAACCGTCAGACGAATTGTATAAT TGAGATCGTAAGATAATAAATTACATTAATCATTGATTATAGTAGTTTTTTAATCGTAAT AAACACTTAATAGTTGACTACGAATCTCAATAGAATATTCTTATTGGAAATGTTATGTGT TTCTATGGGATCCTCCCTATAGTGAGACNTATTACTCA |
| GenBank Accession | BX654031 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:19629163 - go to primer design |
| BLAST e Value | 1e-79 |
| Hit Clone Code (BAC ID) | F8J2 |
| Hit Gene Code | At3g52930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Aldolase superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX891974 [GenBank] |
Gene hit At2g03280
| Sequence (A. th genome BLAST matches underlined) | >35-K021860-022-594-C05-8409 NAGCCATTTACAAGTGAATATATCCTGTTCACCACTGCTAATCTTTTGACTTCCACAAAG ATGTTATTGAATTGTCTTGGACTTGAAACCATACTATGTGAGCCATCCCATTCCTGTAGT AAGGGCTAATCTCTTTGCACCACCAAAAATCTCACCAGCTGCAATGTATATCTGTGTATC CTTTTGAAACCCCAATGCTTTAAGAACCAAAACCGCCTCCTCCGGTGTCAAAGGACACAG TCCTTGCACTCTCCTTTCTTCTGAAACTATCTCTTTCTCTCTCCACCATGGATATGCATA CCTATGGGATCCTCCCTATAGTGAGA |
| GenBank Accession | BX654032 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:996708 - go to primer design |
| BLAST e Value | 7e-100 |
| Hit Clone Code (BAC ID) | T18E12 |
| Hit Gene Code | At2g03280 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | O-fucosyltransferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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