SimpleSearch - Line and FST details
Line specific information
| Line ID | 595B10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N457046) |
| Segregation Analysis | 50:23:20 |
| Confirmed for Hit | At3g02590 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 11093 |
Gene hit At3g02590
| Sequence (A. th genome BLAST matches underlined) | >74-K021862-022-595-B10-8409 AGCCATTTAAATTGAATATATCCTGGCCTACGGTACGATATATTCCATTTACTGTGCAGC GAGAGAATTAGCTTCCGAGCCTTATACGTAACTTCCCTACGGTACATATATTTATGTCTT TCTTTTATTTGATTTAATATCATGACCTCCTATGGGATCCTCCCTATCGTGAGTCTAATG ACTCAAATCTCTGATGATTATTAGCCTCAATTATATAATTGCTGGATGAAGAGTTACAGA TTTGGACAAAATCTGAAGGGTTTAATAGGTCAGTTGCGGTGTCAGTTTTACCACAAACCA CAGTAATCTTTGAATCTTCCAAACTTGTAAAATAAATAATTATACTCATATGGTAGGTGA GGTTGCTCAAGATATGATGATCATGTAAGAGGCACAGTTTCCTCTTTTGAAAGTTAAGGT TAACCATTTGAATA |
| GenBank Accession | BX654109 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:550539 - go to primer design |
| BLAST e Value | 3e-108 |
| Hit Clone Code (BAC ID) | F16B3 |
| Hit Gene Code | At3g02590 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Fatty acid hydroxylase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T31E10
| Sequence (A. th genome BLAST matches underlined) | >74-K104963-0022-595-B10-8409 NAGCCATTTACAATTGAATAATCCTGGCCTACGGTACGATATATTCAATTTACATGCAGC AAGAGAAGTAGCTTCCGAGCCTTATACGTAACTTCCCTACGGTACATATATTTATGTCTT TCTTTTATTTGTTTTAATATCATGACCTTCTATGGGATCCTCCCTATAGTGAGTCGTATT ACTCATTGGGCTATNCTGATTTGGTACCTCCCAGTTGGACGTGATCGTCGACCCACTATG GAATCGACCCTAAATTTGGAAAAATCGATTCATTCCCTATCCCTGGTATTTAAGGGCGAA GGCAATAGACAAATTGTGTCTAATTCGGAAATCTTTTTTTCAACGTGGTAACATTCCCGT CCCAAGGGGG |
| GenBank Accession | FR812827 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:14599113 - go to primer design |
| BLAST e Value | 2e-47 |
| Hit Clone Code (BAC ID) | T31E10 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR812826 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
