SimpleSearch - Line and FST details


Line specific information

 
Line ID 596G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N457198)
Segregation Analysis 50:44:31
Confirmed for Hit At5g56530
Parent of DUPLO pair none
Parent of pair(s) 5752, 5788, 5847, 8744, 84439, 84452, 84476, 84490, 84495, 84504, 84508, 84512, 84514

Gene hit At5g56530

 
Sequence (A. th genome BLAST matches underlined) 
>47-K025557-022-596-G06-8409
TCGGAATGAGCCATTTACAATTGAATTGATCAGTTATGGATTCTTGGAGGTTCTTTTGGT
CAAGATCTCAACAGCATTGAAGCTGGTTGGCAGGTAAAGCACCTATGGGATCCTCCCTAT
AGTGAGACTCATANGTCCGCCCCTGCCCAATATTTCGATGATAATATTCCACTCATTTAA
TTCGAGAAAAATCCCGTGATTGATGCTGCTGAGTTACCAATAATATGGGCAACGAAAGCC
ATTTAATTACAAAATCCGATTAGCTGTATCGAGATTGGTTATGAAATTCACATGCTAGGG
TACTGTCTGGATAATTAGCTAAAAGATAATAGGAAACCAGGTTATTTATCCATTTCAGAA
AAGGCGAAATGGCGTCACCGCGAGCGTCACGCGCATTCCGTTCTTGCTGTAAAGCGTTGT
TTGGTACACTTTTGACTATGGGATCCTCCCTATAGTGAGGCGANAGATACTACAGATTTA
CATAAAAAAAAGTTAGTTAAACACACTTATCAAGTTTATAAAA
GenBank Accession CR356431 [GenBank]
Graphic View Graphic view of gene At5g56530
Predicted Position of Insertion Chr5:22890422 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) MKN22
Hit Gene Code At5g56530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tRNA-splicing ligase (DUF239)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37