SimpleSearch - Line and FST details
Line specific information
| Line ID | 598A04 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6683, 6690, 8951, 8952, 10720, 76032, 76067, 76175, 76209, 76243, 76334, 76360, 76415, 76496, 76524, 76526, 76530, 76531, 76537 |
| Note |
Gene hit At5g35111
| Sequence (A. th genome BLAST matches underlined) | >25-K021259-022-598-A04-8409 AATTCCTATGTTAGAGCGGTTTAATTTTCCTAAGTTTACAANCAGACCAAGAGAAGAACA ACGGAGTCTCATGGGACTCCTCCCATAGTGAGATCTATTACCTCTGGGAGTGGGCCCAAA TGGATGGGTCACTGCTTGGTGGGCCCCCCCTCATGAGGAGAAAGGGAGCCTCTGGGGGGG GGGGGGGGG |
| GenBank Accession | FR812968 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:13366699 - go to primer design |
| BLAST e Value | 6e-05 |
| Hit Clone Code (BAC ID) | F7N22 |
| Hit Gene Code | At5g35111 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 569A11 |
| Other FSTs Supporting this Hit | FR812968 [GenBank] |
Gene hit MXI10
| Sequence (A. th genome BLAST matches underlined) | >25-K023731-022-598-A04-8409 ATTGAATATATCCTGACAGAGACCAAAAGAGAAGGAAACGAAGCGTTTCACGCTTGACTG GTTTGAAAGAGAAAACGCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCATGGGTTT GGCCGGATTTGGTAACGCAATGGGATTGGCGCTCTTGGTAGTTCGTTGGATTCCGTTGTT TTGGGTCTTGGGTTTATGTTGGTTCCCTTAGTTTCTTTTGTTTTTGGTATTTTTGGTTGA TTCTCTCCTCCGCGGGTCGCTCCCGAGACATTCAAGCAGACTCTGCTTTCACTCCTTGGA ATATTTGATTGGACTTGCTCAATACGCTTTCTCGTTGATTCTTACTTACTGTACTGTCAG TTACCTCGCATCTGTTGCGTGTGCACGCCGTAGTCTATTCTTCCATTGAATAGTTATCGA TTGTTATCCTTGTCCGTGGTCATAGATCGCAACGGTAGAGAACAGGTTTGCTTCGTACTT CTATATATGTCCTTCTCTCCTTTTTGCTTCTATTTTCCAAGCTAAGTATTATTTTCATTT TTTAGTTTACCTCTTTA |
| GenBank Accession | BX892026 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:15348633 - go to primer design |
| BLAST e Value | 5e-21 |
| Hit Clone Code (BAC ID) | MXI10 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g38383
| Sequence (A. th genome BLAST matches underlined) | >25-K023805-022-598-A04-8409 GNAGCCATTTACATTGAATATATCCTGACAGAGACCAAAAGAGAAGGAAACGAAGCGTTT CACGCTTGACTGGTTTGAAAGAGAAAACGCTATGGGATCCTCCCTATAGTGAGTCCTTAG TACTCTTGCTCTGTTAGGAGTCGTGAATGAACCCGGAATTGAGGGCCATAATGGAAATGG CCAAGCTAATGGGGATGGTCATATGCCGCGGGGGGGACCAAGAGCTCATCAACCAATTGG AGCCTTTGATGAGCCAAACATCCGTGGAAATAGAAACGGTATTCAAGCTCCTCCGGTTGA GAACAACAACTTTGAGATTAAATCAAGCCTCATCAACATGGTTCAAAGCTCTAAGTTTCA TGGTTTATCAGTGGAGGACCCTTTGGATCCTCTATGGGATCCTCCCTATAGTGAGACCTT GATA |
| GenBank Accession | BX892027 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr5:15352724 - go to primer design |
| BLAST e Value | 3e-124 |
| Hit Clone Code (BAC ID) | MXI10 |
| Hit Gene Code | At5g38383 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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