SimpleSearch - Line and FST details


Line specific information

 
Line ID 600B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N457527)
Segregation Analysis 50:43:37
Confirmed for Hit At3g03810
Parent of DUPLO pair 2515
Parent of pair(s) none

Gene hit At3g03810

 
Sequence (A. th genome BLAST matches underlined) 
>82-K023189-022-600-B11-8409
NAGCCATTTACATTGAATATATCCTGTATGCAGTAATTTTTATATCCATATAGATATTTG
AGTATATATCCCTTCTGCCTGCTAACTACCATCACTCGTCATAACATGTTCTATGGGATC
CTCCCTATAGTGAGTCCAATTAATCCCCCCTATATACTAATTTGGCTATATGATGGGTTA
ATATTGAATAGATTATGAGAGGGGGGGGTGACAAAATGTCAACAACACAANTTACTTATA
NCAAAATGTTCTGAAACCCTAATACTCAAATGACATCAAGTGG
GenBank Accession BX892239 [GenBank]
Graphic View Graphic view of gene At3g03810
Predicted Position of Insertion Chr3:974603 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) F20H23
Hit Gene Code At3g03810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-fucosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T1J24

 
Sequence (A. th genome BLAST matches underlined) 
>82-K023961-022-600-B11-8409
GTCGACCGAGGTATTCTAAACTACTCTATCCCATCTTCAGAAACCTATGGGATCCTCCCT
ATAGTGAG
GenBank Accession BX892241 [GenBank]
Graphic View Graphic view of sequence BX892241 of line 600B11
Predicted Position of Insertion Chr4:2889416 - go to primer design
BLAST e Value 2e-11
Hit Clone Code (BAC ID) T1J24
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37