SimpleSearch - Line and FST details


Line specific information

 
Line ID 600E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N457560)
Segregation Analysis 50:39:36
Confirmed for Hit At3g05580
Parent of DUPLO pair none
Parent of pair(s) 5238, 5248, 7538, 83722, 83734, 83746, 83757, 83774, 83781, 83789, 83796, 83803, 83818, 83821, 83825

Gene hit At3g05580

 
Sequence (A. th genome BLAST matches underlined) 
>61-K023925-022-600-E08-8409
AAGTTCTTGTGGAAAATTCACCTTCTAGAGAGGATTATGGCTCTCGCAACCTCCTCACAT
TGAGATCAGGTACCGAAAATGGGGAAGTCTTGAAACTTACTACTGCTTATTGCCTTGAGA
GATGTGGTTTCACAAGCTCAAGCTATGGTATCCTCCCTATACTGAGAACGATCCGTCGTA
TTTATGGGCGAATGTTTTTCCAATTCTAAACTGTATAGGTCCGCAGCGTTACTACAAAAT
GAAAGTACATTTTGATAAGGCGACAAATTACAACCCGACGAATTTGTAGGCGAAGGCAAT
AAACAAATTATTCTAATTCGGAAACCTTTATTTCGAGGGGGCTACGTTCCCGTCCAAAGG
GGGGGCTTAAGAAGAGAACGTGCCCGAGCAATGACAAGGGATGCCCCCTTCCAAGAGGGG
CGCGGGGATCCTCCCGGCAGGGGGGGCTAAGGGGAGCTCGGGTATGCCGCCCCAAGTGGG
AGGCCAGAGGAGTGGGACCGTCGGGAGGCGGGAGGAGGCGGAAGAGGAGGAAACAGAGAG
GGCACGCCGAACCATAATGCAAGGGATGCTGCGGAGGGTGCACGGGAGCTGCAGAGACGG
AGACAGATCGAACGGCAGCAGAGCAGAAGGGCAGAAGGTGCCCGCCGGGGTATGACGGAG
AAGGAGAG
GenBank Accession BX892271 [GenBank]
Graphic View Graphic view of gene At3g05580
Predicted Position of Insertion Chr3:1618352 - go to primer design
BLAST e Value 4e-29
Hit Clone Code (BAC ID) F22F7
Hit Gene Code At3g05580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcineurin-like metallo-phosphoesterase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37