SimpleSearch - Line and FST details


Line specific information

 
Line ID 617D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N459174)
Segregation Analysis 60:44:38
Confirmed for Hit At4g24510
Parent of DUPLO pair none
Parent of pair(s) 4096, 9915, 9933, 9950, 83535

Gene hit At2g45580

 
Sequence (A. th genome BLAST matches underlined) 
>12-K021917-022-617-D02-8409
CTTCTATTGGGATCCTGCAGCTCCTTTGATCCCTATGGGATCCTCCCTATAGTGAGACNT
ATTACTCNNNN
GenBank Accession FR813346 [GenBank]
Graphic View Graphic view of gene At2g45580
Predicted Position of Insertion Chr2:18783001 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) F17K2
Hit Gene Code At2g45580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 76, subfamily C, polypeptide 3
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g24510

 
Sequence (A. th genome BLAST matches underlined) 
>12-K021913-022-617-D02-8409
TGGGATCCTCCCTATAGTGAGACTTATTTTCCCGTGGATCTTGAATAGCTGCGTCATTGC
CCATTCGATTGTACTTTGGAAACATTCTCAAATTGAGTCCTATCACGTCCTGGAACCAAT
ATGGGATGGTCCATATATGTGATGTTGTGAATATGAGCGTTCACCATGATTACGAGCATG
ATAGGTTAGTTCGGGGGTTTTCAGCGTATCCGGTTTTGTTGGATCATGAACCAATAACAT
TCTACTTAGATGAATAAATATTAGATATATGCTGAATAATATATTTAGGGATGTGGAACC
CAATCTTCCATGGGATCATCCCAATAATGTGAAACTGAGTTATCTGAAAAACGAATTTCG
AAGTAAAAAATTTAGTTTACTCCATGGGATCATCCCTATAAGTGAGAGGGGGCATCAGGG
GATCTACCTGTGAGTGG
GenBank Accession BX656648 [GenBank]
Graphic View Graphic view of gene At4g24510
Predicted Position of Insertion Chr4:12662044 - go to primer design
BLAST e Value 4e-18
Hit Clone Code (BAC ID) F22K18
Hit Gene Code At4g24510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HXXXD-type acyl-transferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37