SimpleSearch - Line and FST details


Line specific information

 
Line ID 622E07
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 4710, 4859, 4874, 4958, 92275, 92290

Gene hit At2g36290

 
Sequence (A. th genome BLAST matches underlined) 
>53-K021997-022-622-E07-8409
NNNNTAGCGTAATTTCGGACATGAAGCATTTACAATTGAATATATCCTGCAGTATTATTC
AATTGATTTGGTTTTCTTTACTAATAAAACGAAATTTAAAGCTATGGGATCCTCCCTATA
GTGAGTCGAAGGAATCCTCGCTTTAGAGGGGAAGGGGGACCCAGGGAGTTTCCGATTGTG
GGGGCCAAGAGAGGGACCTCATAGAAGGGTGTTTTGAAGGGAGAGGGGGGGGGGAGGAGA
GGAAGTATCAGAAGAAGCGGAGAGGAGTCGAAGCGCGGAAGTAGCTAGAGGGTGAGGGCC
AAACGAGAAAGGGGATGTGTCAGCTGCAGCGCTAGGAAACATAGAGAGCAAAAAAGAAAA
AGCAGAAGAGCAGCGTGACGAGAGCGGAGAGAAGGAAAGGGA
GenBank Accession BX657093 [GenBank]
Graphic View Graphic view of gene At2g36290
Predicted Position of Insertion Chr2:15210391 - go to primer design
BLAST e Value 1e-15
Hit Clone Code (BAC ID) F2H17
Hit Gene Code At2g36290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit MEE6

 
Sequence (A. th genome BLAST matches underlined) 
>53-K021999-022-622-E07-8409
AGGAAGAAGCCATTTAAATTGAATTGATTTAGGTTAGCTTTCTTGCTACTTGGATCCACG
TCATAAATTGTCAGACGATTAAAAAAATTTCCAAGCCGAACAAGTGGCTGGTTAACTCGT
TACCTCCTGTCCGGTTGGGGTAATATGGTTAGGTAGGTCACTATGGGATCCTCCCTATAG
TGAGATCGATTACTC
GenBank Accession BX657094 [GenBank]
Graphic View Graphic view of sequence BX657094 of line 622E07
Predicted Position of Insertion Chr5:16440704 - go to primer design
BLAST e Value 1e-55
Hit Clone Code (BAC ID) MEE6
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37