SimpleSearch - Line and FST details


Line specific information

 
Line ID 625C07
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 3472, 3475, 93080

Gene hit At2g34300

 
Sequence (A. th genome BLAST matches underlined) 
>51-K022320-022-625-C07-8409
CACCGCCCGGCACTGGAGCACGGTTCAATTCCTAAAGAAGTTTACGCACCTTCATATTAG
ACAACAACAAAGATTAGAAGTTCATTCTATAGAGTAGGAGTAAGGCATAAGAATACAATG
GGGTACACTTTTTACCTTCAATATGCCGAGGGACTCTACAACGAGCACAATGGATAAGGT
CAAAAACAGAACCGGGAAACGGTAATCTTTTGGTTCCCATAACGTTTAACATTGCAGGAA
TACCACGTTCCAGCGCGAATTGCACTTGCGCCTCATGCTCATCTTTGGGAGCAAATGACA
AAGCAAGCACATCTCTTTCGAAAAGGTAACCACCAAAGCTATGGGATCCTCCCTATAGTG
AGACCAATGAATCCCCCCTATATACTGGATAGTGGAAATCCCGATAAAACTACTATATAA
AATCTAAACGATAGAGCAAAGAAGCAACTAGAAG
GenBank Accession BX657610 [GenBank]
Graphic View Graphic view of gene At2g34300
Predicted Position of Insertion Chr2:14475140 - go to primer design
BLAST e Value 1e-169
Hit Clone Code (BAC ID) F13P17
Hit Gene Code At2g34300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit BX657609 [GenBank]

Gene hit MMG15

 
Sequence (A. th genome BLAST matches underlined) 
>51-K022083-022-625-C07-8409
TATAGGATATATATAGTATGTACCCCTTATAAGAAGGGGGTATGGTAAGTGTAATATTTG
TGAGATATTAGATTGAAGGTGAGTGATGTTTTTAAATTGGAAGTAATATTAAGATGTTTT
ATGTTATGATACCTCTAGAAAAAAATATAGATGTTATAGTGTGTGTTGAAGATTGGTGAT
ATTAGTGAATTAGAGGGATGTGATAGTTAGTATGTATGATGTGTAAGATGTAATGGATGT
TGATGTTGGTTGGAATATTTATTTGATTAATGAGTTTTATTGATGAGTTGTTGGTTATAA
TGAAATATATTATTTTAAATTAATA
GenBank Accession FR813507 [GenBank]
Graphic View Graphic view of sequence FR813507 of line 625C07
Predicted Position of Insertion Chr3:10420731 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) MMG15
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37