SimpleSearch - Line and FST details
Line specific information
| Line ID | 625F12 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12524 |
Gene hit At2g30530
| Sequence (A. th genome BLAST matches underlined) | >94-K022320-022-625-F12-8409 TTACAATTGAATATATCCTGCCGCCACCGCCGGTTTGGCCCCGTGGATCGTTGCATGTCG CTTTCTGGTGACACTTAATTGTGCTAAGCGAATCATGTCCTTAGTCAGCTTCTGCATCAA GTGACATATTACACATGATTCAAGGGTTAACTCTGTTTTTGCCTCTGTTGAATCATGTGA ATAGGAGGTGAAAACCGCTTATGAGTATACTTCTATGAAAAGTTTGAATGAACCAAAACG AGGCTTTTGGGGAAGTTTAGCTATGGGATCCTCCCTATAGTGAGAGACATCGTCCCTA |
| GenBank Accession | BX657673 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:13009321 - go to primer design |
| BLAST e Value | 4e-43 |
| Hit Clone Code (BAC ID) | T6B20 |
| Hit Gene Code | At2g30530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | zinc finger CCCH domain protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
| Primer and wt-amplicons | show primer details |
Gene hit At5g28320
| Sequence (A. th genome BLAST matches underlined) | >94-K022316-022-625-F12-8409 NNNTTCCGAGCTATTCCGGAATGAGGCCATTTACAATTGAATATATCCTGCCGCCGCTGA CCGCTTTGCACCCGGTGGAGCTTGCATGTTGGTTTCTACGCATAAATGAGCCGGATAGGC AGATAGTTTCCATTGGAAGCCGCGCTATAGTGAGTCGTATTACTCAGTGGGCTACACTGA ATTGGTAGCTCCCATTTGGACGTGAATGTAGACACACTATGAAACGCCCGCTACACTAGC TTTCAATCCCTCGGAATCATCAATGAGATCGAAATTATGGGTTTCGTTCATAGGCTACGA ACTGTGCACACAGATTTTGAGAGTCCCAAAAGAGCTTTATAAAGATGGACAACATGAAGC TATATAGAAAGCGACTAAATTAGAGAAGGGGAGAAAAAAAAACGTTGCCATATAAGAGGA AGACAAAATATAAAGGATACGACAGGGGGGAGGAAAAAAGATCAATGAATAATAAAGACG AACATGAGAAAACGAAAACTCTAAATTAACAAAAGAAACCACAATGCAGAGCAAAAGAAA ATAAGTGCAAAGGCGAGGAAGAA |
| GenBank Accession | FR813519 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr5:10302150 - go to primer design |
| BLAST e Value | 4e-12 |
| Hit Clone Code (BAC ID) | T8M17 |
| Hit Gene Code | At5g28320 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | embryo defective protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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