SimpleSearch - Line and FST details


Line specific information

 
Line ID 625F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N459976)
Segregation Analysis 50:22:20
Confirmed for Hit At2g30530
Parent of DUPLO pair none
Parent of pair(s) 12524

Gene hit At2g30530

 
Sequence (A. th genome BLAST matches underlined) 
>94-K022320-022-625-F12-8409
TTACAATTGAATATATCCTGCCGCCACCGCCGGTTTGGCCCCGTGGATCGTTGCATGTCG
CTTTCTGGTGACACTTAATTGTGCTAAGCGAATCATGTCCTTAGTCAGCTTCTGCATCAA
GTGACATATTACACATGATTCAAGGGTTAACTCTGTTTTTGCCTCTGTTGAATCATGTGA
ATAGGAGGTGAAAACCGCTTATGAGTATACTTCTATGAAAAGTTTGAATGAACCAAAACG
AGGCTTTTGGGGAAGTTTAGCTATGGGATCCTCCCTATAGTGAGAGACATCGTCCCTA
GenBank Accession BX657673 [GenBank]
Graphic View Graphic view of gene At2g30530
Predicted Position of Insertion Chr2:13009321 - go to primer design
BLAST e Value 4e-43
Hit Clone Code (BAC ID) T6B20
Hit Gene Code At2g30530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc finger CCCH domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g28320

 
Sequence (A. th genome BLAST matches underlined) 
>94-K022316-022-625-F12-8409
NNNTTCCGAGCTATTCCGGAATGAGGCCATTTACAATTGAATATATCCTGCCGCCGCTGA
CCGCTTTGCACCCGGTGGAGCTTGCATGTTGGTTTCTACGCATAAATGAGCCGGATAGGC
AGATAGTTTCCATTGGAAGCCGCGCTATAGTGAGTCGTATTACTCAGTGGGCTACACTGA
ATTGGTAGCTCCCATTTGGACGTGAATGTAGACACACTATGAAACGCCCGCTACACTAGC
TTTCAATCCCTCGGAATCATCAATGAGATCGAAATTATGGGTTTCGTTCATAGGCTACGA
ACTGTGCACACAGATTTTGAGAGTCCCAAAAGAGCTTTATAAAGATGGACAACATGAAGC
TATATAGAAAGCGACTAAATTAGAGAAGGGGAGAAAAAAAAACGTTGCCATATAAGAGGA
AGACAAAATATAAAGGATACGACAGGGGGGAGGAAAAAAGATCAATGAATAATAAAGACG
AACATGAGAAAACGAAAACTCTAAATTAACAAAAGAAACCACAATGCAGAGCAAAAGAAA
ATAAGTGCAAAGGCGAGGAAGAA
GenBank Accession FR813519 [GenBank]
Graphic View Graphic view of gene At5g28320
Predicted Position of Insertion Chr5:10302150 - go to primer design
BLAST e Value 4e-12
Hit Clone Code (BAC ID) T8M17
Hit Gene Code At5g28320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation embryo defective protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37