SimpleSearch - Line and FST details


Line specific information

 
Line ID 626D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N460048)
Segregation Analysis 50:46:34
Confirmed for Hit At3g19170
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At5g11510

 
Sequence (A. th genome BLAST matches underlined) 
>92-K022016-022-626-D12-8409
AAAAACTATAGTTCAGTCAAGAAGAAACTTGATTCCTACATGTCAGTCTGGCCTTTTGGA
TCAGTACCAAGCCATGCCCCTATGGGATCCTCCCTATAGTGAGTCCTATTACTCACCCGT
TTGGACGTGAATGTAGACACGCGTGATGCCCAACCTATGGGATCCTCCCTATAGTGAGAC
TATGGAATCCTCCCTATAGTGGGCTACATTGAAATGCTAATTATTATTCGTACAAGCATG
AAAACTCACCATTTGATCTCCCCTATAATAAGACTTAAAACGCCTGCAGGCAAAAACCGA
AGTAAAATAATCAGCTAAACCCATATACTATGGGATCCTCCCTATAATGA
GenBank Accession BX657788 [GenBank]
Graphic View Graphic view of gene At5g11510
Predicted Position of Insertion Chr5:3681762 - go to primer design
BLAST e Value 2e-26
Hit Clone Code (BAC ID) F15N18
Hit Gene Code At5g11510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 3r-4
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 561F08

Gene hit At3g19170

 
Sequence (A. th genome BLAST matches underlined) 
>92-K022321-022-626-D12-8409
CTATGGAATCCACCCATATAGTGAGTTCTTACACACAAATTAAACCTGGGATCCTCCCTA
TGGGGACCCCCATAACTCGAGGGTTAGTACGTAACTGTTTACACTTTGTGGTATCCTCCC
TGTGGTGAGCCCTTGGGTTTGAGCGAAGGGGAGTTCACGAAAATTTAGAACTCTTGTGAC
TGTAGGTTTGTGGGTTGGCCCAGAACAGGGGAAATCAGGATGAGAGTAAGTTACCGAGAG
CGGCTAGACACAGAGCAAACTGGAGCGAAGCAGAAGAGACAAGGAAGGGCGAAAGGGCAG
ACAGAAGGGGAAAAACGGGAGAAGGGAGGTAACGGGCACACAGCGGAGAAACACATAGCG
AAAATAACAAAAAATCCAAGAATGAAAAGAGTACA
GenBank Accession BX657790 [GenBank]
Graphic View Graphic view of gene At3g19170
Predicted Position of Insertion Chr3:6632351 - go to primer design
BLAST e Value 0.003
Hit Clone Code (BAC ID) MVI11
Hit Gene Code At3g19170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation presequence protease 1
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Other FSTs Supporting this Hit BX657790 [GenBank]


Last Updated on 10.06.2021 13:37