SimpleSearch - Line and FST details


Line specific information

 
Line ID 630G12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12127

Gene hit T22E16

 
Sequence (A. th genome BLAST matches underlined) 
>95-K114692-0022-630-G12-8409
ATAAAGAACCTTTCTATGTGAACCAAATTAGAATTATTGTTACATTTTGTTTTGGTAATT
CTCGTGAAAAGGAGGAATAGCTCGAAGGTCTTTTTCACACTTTCATTACCGACGCCACTC
CCGCATTAGATACCCAAACAGTTCGGTTGCTACAACATTTAAAGAGAGACCAGCACAAGT
TTTGAGTTATTGTCTCTTTTGTGTGTACCTAATCCATTTTTTTTTTTTTAAAAGAATAAA
TTTTCGGGGGTTTTTGGCTTTCTAAAGGAAATGCAAAAAAGGCCCCGTGTAAAAAAAAGA
AAACCCGGTTTTCAAACAAAGGGGGATTTTCTCAAACGGGCCGGGCCCAAAATNNTNNNC
GACTCCNCTCCTNCATTATTTACCNCCCCAGTTCTGTTGCTGCAACATTTATAGAGAGAC
CACCAAAAGTTTTGAGTTATTGTCGCTTTTGTGTGTACCTAATCCA
GenBank Accession HE664960 [GenBank]
Graphic View Graphic view of sequence HE664960 of line 630G12
Predicted Position of Insertion Chr3:20533755 - go to primer design
BLAST e Value 6e-72
Hit Clone Code (BAC ID) T22E16
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit HE664960 [GenBank]

Gene hit T27D20

 
Sequence (A. th genome BLAST matches underlined) 
>95-K022050-022-630-G12-8409
AGCCATTTACATTGAATATATCCTGGAACTCTCTATCATTATCATGAGATTGTGAGAATC
CTCCCCATGCTGGGACTGAGCGACGATCCTGAACTATGGGATCCTCCCTATAGTGAGAGG
TATTCCACTCTGGGCTGCTCCGAATTGGTAGCTCATTGGGATCCTCCCTATAGTGAGTCG
TATTAATCACACCACTATGGGATCCTCCCTATAGTGAGACCNCCCCTATACCCTTATTCA
AAAATATCTTTCCTCTATTTCCTATACTATCCATCTGTCATTATATCTACTTCCTATCTC
TCTTAAACTTTATATAATACCATTCTACCTATATATCCCTATCCCATCACTTTCAACTAA
ATGTTCGGATCCCTCTCTCTACCCTTTCCTATATGTGTCATTAACCTACCAATTATTTTG
TGTTTATATT
GenBank Accession BX892768 [GenBank]
Graphic View Graphic view of sequence BX892768 of line 630G12
Predicted Position of Insertion Chr4:2013328 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) T27D20
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37