SimpleSearch - Line and FST details


Line specific information

 
Line ID 633B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N460688)
Segregation Analysis 50:28:21
Confirmed for Hit At5g49890
Parent of DUPLO pair none
Parent of pair(s) 3609, 9745, 10835, 96232

Gene hit At5g49890

 
Sequence (A. th genome BLAST matches underlined) 
>26-K023278-022-633-B04-8409
TGAAGCCATTTACATTGAATATATCCTGAGAAATCGAAAAGAGGCAAAGAAATGATATTA
TGAAAGAGTAACTCGTTGGAAAATGACTTTATGAAAGAGCCAACTTGTTGAGAAATGACG
TACTCGTTTATAATGCTATATGTGCGGAGGACTTTGCCCCCCGGTAGCCGTACCCCCCTC
CCCCCCCCCCCCCCG
GenBank Accession BX892842 [GenBank]
Graphic View Graphic view of gene At5g49890
Predicted Position of Insertion Chr5:20289816 - go to primer design
BLAST e Value 2e-60
Hit Clone Code (BAC ID) K9P8
Hit Gene Code At5g49890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation chloride channel C
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX658239 [GenBank]

Gene hit T8E24

 
Sequence (A. th genome BLAST matches underlined) 
>26-K022798-022-633-B04-8409
CCCCTCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCTCCCC
CCCCCCCGCTCCCCCCCCTCCCCCACCCCCCACCCCCCCCCCCCCCCCTCCCCCCTCCCC
CCCCC
GenBank Accession BX658238 [GenBank]
Graphic View Graphic view of sequence BX658238 of line 633B04
Predicted Position of Insertion Chr3:2094841 - go to primer design
BLAST e Value 5e-11
Hit Clone Code (BAC ID) T8E24
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37