SimpleSearch - Line and FST details


Line specific information

 
Line ID 635C04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 65062, 95487

Gene hit At5g11220

 
Sequence (A. th genome BLAST matches underlined) 
>27-K023732-022-635-C04-8409
NNTTTCGTGGTATTCGGACATNAGCCATTTACATTGAATATATCCTCCAAACCATTGTAG
GCATGAAAAGTGTGTAGTTGTTCTATGGAGGGTGGGGACTTGATCTATCTCAGATTCTAT
CACACTATTGTTAACAACCATACTAGGGTATCCTCCCTCCAGTGATTCTGATTATACCTA
GCGAGGCTGTCTTGTGCTTCCAATGCCTTGATTCTGCTGAGCAGCCAAATGACTTCAATC
AGATCCCTCTTACTGCAGAACTCTTAGCAAAAGACATATCTCTTCAAATATTTCACAAAC
ACCGATACAGTGCTATTGCAGGAATCAGAAACTTTTTAACCACTGTTTGTTCTATGGGAT
CCTCCCTATAGTGAGTCGTATTACTCATGGGTTTGCACGTAATTGGTAATACATTGCACC
TTTCCCCCTCTGAACTCAAAA
GenBank Accession BX892962 [GenBank]
Graphic View Graphic view of gene At5g11220
Predicted Position of Insertion Chr5:3577029 - go to primer design
BLAST e Value 3e-93
Hit Clone Code (BAC ID) F2I11
Hit Gene Code At5g11220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification 5' region
Confirmation Status unknown
Other FSTs Supporting this Hit BX892961 [GenBank] BX892962 [GenBank]

Gene hit T9A21

 
Sequence (A. th genome BLAST matches underlined) 
>27-K023197-022-635-C04-8409
AGAACAAAAAAATACTAATTAGATAGTTAAAGCAGACAAACCAATTCTGTTCCACACTAT
AAATTATAATGGAAACTGATTGAA
GenBank Accession BX892960 [GenBank]
Graphic View Graphic view of sequence BX892960 of line 635C04
Predicted Position of Insertion Chr4:10114292 - go to primer design
BLAST e Value 4e-28
Hit Clone Code (BAC ID) T9A21
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37