SimpleSearch - Line and FST details


Line specific information

 
Line ID 641E01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 11849
Parent of pair(s) none
Note

Gene hit F5O8

 
Sequence (A. th genome BLAST matches underlined) 
>05-K023211-022-641-E01-8409
ACCCCCACAACTTAAATTGTCTATGGGATCCTCCCTATAGTGAGGCTTATTAGTCCCCCC
TTCTACAATATTATCAATTGCGACACATGCACATGTTTCTAATTAGACCCGAGATGAAGA
AATTGATTACAAAACATAATATTTATAGATCAATTTAATAACATGAATAAAAGGAGGACG
ACAACGCGCAAATAGGATTTATAAAATAACTAGTACGCTCTGCTCATTGATCTAATAAGT
TATTATGAAGAAATTACGATAACCAAGATAATATACAATAGACAGCAACACAGATCGAAG
TGTACAATGATATGAATACGTGAAATGAATAATAGTACTACAAATTCACATAAACATTCT
CGAAATACATATGAAGAAAGCCGAATTA
GenBank Accession FR813816 [GenBank]
Graphic View Graphic view of sequence FR813816 of line 641E01
Predicted Position of Insertion Chr1:8404522 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) F5O8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g56340

 
Sequence (A. th genome BLAST matches underlined) 
>05-K022816-022-641-E01-8409
CATGAATTCATCATTAATCTGGATCACCATTTGTGAACACATGTGACACCAATACCTATG
GGATCCTCCCTATAGTGAGTCGTATTACTC
GenBank Accession BX658965 [GenBank]
Graphic View Graphic view of gene At5g56340
Predicted Position of Insertion Chr5:22818328 - go to primer design
BLAST e Value 7e-11
Hit Clone Code (BAC ID) MCD7
Hit Gene Code At5g56340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status failed
Other FSTs Supporting this Hit FR813815 [GenBank]


Last Updated on 10.06.2021 13:37