SimpleSearch - Line and FST details
Line specific information
| Line ID | 646C11 |
| Vector Used | pAC161 |
| Line Availability | line died - no seeds available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 80788, 80789 |
Gene hit At2g34820
| Sequence (A. th genome BLAST matches underlined) | >83-K023086-022-646-C11-8409 GCCATTTACAGCCGACACGATTTGTCTCGTAGACTCATACACGTTTACTTATTTTTTTGG GTATAAATCCATACACGTTATTGGTAATTTAGCTATGGGATCCTCCCTATAGTGAGTCGT ATTACTCAAGGGGTGACACAGAAATGGTAACACAATGACATTACAGATATAGTATTAGTT CCCAGTTAAGAGGAGATGAGGGGGGAGAATTAGCCCCTAAATCAACAAGACAAAACACTA ACTAAGAAGACAAAACAACGATAACAGACACAAATTTAGGCATAGAGAACTTCAGGCTTG AAACTAAAACTATGGGATCCTCCCTATAGTGAGGCAAAGGGATCCTAAGACAAAAAGGAG GAAGACACGCGACTGCTAAGAGATAAGGAACTGTTAAGATTACAAGAGAAGGGGGGGGGA GAGAACAGATCCACGATAGATAACACGAAATAAGTAAATTGTTGCTAAGAGACAACCAAA GCGGGGTGAAGGCGCTGAGACCACAGAAGAAGCGAGGACATAACCAAAATATAAGACA |
| GenBank Accession | BX659473 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:14690877 - go to primer design |
| BLAST e Value | 5e-61 |
| Hit Clone Code (BAC ID) | F19I3 |
| Hit Gene Code | At2g34820 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX659472 [GenBank] |
Gene hit At3g07360
| Sequence (A. th genome BLAST matches underlined) | >83-K022819-022-646-C11-8409 CATTTACAGCCGACACGATTTGTCTCGTAGACTCATACACGTTTACTTATTTTTTTGGGT AAAATCCATACACGTTATTGGTAATTTAGCTATGGGATCCTCCCTATAGTGAGTCGCATT AC |
| GenBank Accession | BX659471 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:2354554 - go to primer design |
| BLAST e Value | 9e-26 |
| Hit Clone Code (BAC ID) | F21O3 |
| Hit Gene Code | At3g07360 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | plant U-box 9 |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR813935 [GenBank] |
Gene hit At4g29880
| Sequence (A. th genome BLAST matches underlined) | >83-K022589-022-646-C11-8409 TGGGACGGTACGCACGCATGATAACTCCTTCGCGCTCTTCCATGGTCAAAAGCCTTGATC TGCCATTGAATGTCCCGTACTTGACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCA CGGGATCATCCCAAAAAGGAGCTACAATGCGTTCGTATCTCTAGGGAATCCGAGAAATAT TGCCCAATTTGGAATAGGGATAAATGGACAATGGGAAAAATGATTTTTTCTTCAC |
| GenBank Accession | BX659470 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr4:14607157 - go to primer design |
| BLAST e Value | 2e-20 |
| Hit Clone Code (BAC ID) | F27B13 |
| Hit Gene Code | At4g29880 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | plant intracellular ras group-related LRR 7 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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