SimpleSearch - Line and FST details


Line specific information

 
Line ID 652F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N462561)
Segregation Analysis 50:47:29
Confirmed for Hit At2g18790
Parent of DUPLO pair none
Parent of pair(s) 4093, 7174, 94649, 94660, 94692, 94698, 94703, 94707, 94709, 94712, 94713

Gene hit At3g03040

 
Sequence (A. th genome BLAST matches underlined) 
>38-K022838-022-652-F05-8409
TGGGATCCTCCCTATAGTGAGACGTATTACTCATGGGACGAGGAGGTGATGTGAAGTTCC
GGAGATCCAGGAATCACGCAAGATTGGAGCATAGAGATTGATAGGAAGGAGACTGATACG
CGCATCATACCTTGCTACAGAGGCCAATCTTCAAATTAGGGC
GenBank Accession BX660312 [GenBank]
Graphic View Graphic view of gene At3g03040
Predicted Position of Insertion Chr3:684705 - go to primer design
BLAST e Value 6e-14
Hit Clone Code (BAC ID) F13E7
Hit Gene Code At3g03040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g18790

 
Sequence (A. th genome BLAST matches underlined) 
>38-K023138-022-652-F05-8409
AAGCCATTTACATTGAATATATCCTGNATTCAGCCGGATTGTTCGAAAACGGCGTGGGAG
TCCTTCCGTACTA
GenBank Accession FR814142 [GenBank]
Graphic View Graphic view of gene At2g18790
Predicted Position of Insertion Chr2:8140303 - go to primer design
BLAST e Value 8e-05
Hit Clone Code (BAC ID) MSF3
Hit Gene Code At2g18790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phytochrome B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37