SimpleSearch - Line and FST details
Line specific information
| Line ID | 654F08 |
| Vector Used | pGABI1 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3082, 65200 |
| Note |
Gene hit At4g37260
| Sequence (A. th genome BLAST matches underlined) | >62-K021351-022-654-F08-8409 CTAAGTATTCTCCATTCGATTGCGATTTTCCCGATCGATGAGGGGATCCTCCCTATAGTG AGAGTTTGATCTGACAATTGCTCCTTTGGGGGAACCTTTGGGAACCCCCCCAATCCGGGG ACGTTCCGGCAAATCTTGTCATCTCCGGTGGTGTATCCCTCTATCTCCGAAGGTATAGCA CCGTGCTTTTTCTCCGGACAAAGACTAGACGATTATTCCAGCTCACGCTCGGTTTGGTAA CAAGTGGGCTACAATCTCTCTTCTTCTCAATGGACGAACCGATAACGCTATCCAAAATCA TTGGAACTCGACGCTGATTCCAAAATGCAGCGTCGAAGGGCAAAGTTGTGATTTTGGTGG TAAAGGAGGGAATGAGGATAATTCCCTACAAGAACAAACTGTCCC |
| GenBank Accession | BX660476 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:17540623 - go to primer design |
| BLAST e Value | 3e-93 |
| Hit Clone Code (BAC ID) | AP22 |
| Hit Gene Code | At4g37260 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | myb domain protein 73 |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 654G08 |
Gene hit At1g01225
| Sequence (A. th genome BLAST matches underlined) | >62-K021385-022-654-F08-8409 CTTTACATTGATATTGGTGTAGTTTTTACATTTGAAGACAATGGTCTATATTCCAATCTT TGCATGACCTAATTTCACCCTGGCTCTGTATTTTGATGTTATTCCATCATATCTTCTGAT CTCTGATGGACTTTATAGATGATTTTTGTTTATTTGACATATTTTTATCCCAATTTCCTC TGGTGATGAAGAATTGATACTGTTGTAGACATTCCTTCATGGGCTTTGATTTGATTGTGG ATTTTTGCAGGAATCTTTGTCGGTGGGTCCAAAGTTGTTCATTTCAGACCTGAACACAAC CCCATGGATTCATCAACATCATCAATATCATCATCTTCCTCTGAAGATATCTGTTCCATA TTTCCTGATTGCGGTTTCAGACAACCGGACAGTGGAGTAGTCCTTTCTTGCTTAGACTGT TTCCTCAAGAACGGCTCACTCTACTGCTTCGAATATGGAGTCAGTCCATCGGTTTTCCTA ACCAAAGTCCGCGGAGGGACTTGC |
| GenBank Accession | BX660477 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:96325 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F6F3 |
| Hit Gene Code | At1g01225 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NC domain-containing protein-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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