SimpleSearch - Line and FST details


Line specific information

 
Line ID 665D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N463790)
Segregation Analysis 50:45:28
Confirmed for Hit At4g21540
Parent of DUPLO pair none
Parent of pair(s) 11801

Gene hit At4g21540

 
Sequence (A. th genome BLAST matches underlined) 
>76-K023518-022-665-D10-8409
AGCCTTTACATTGAATATATCCTGATAGTTTAAACCGAAGGCGGGAAACGACAATCTGAT
CCCCGGGTACCCTGTCCTCTCCCAATGAAATGAACTTCCTTATATAGAGGAACGGTCTTG
CGAAGGATAATGGGTATCTGTGCTTGCTCCCTTACGTACCATNAGATATCACCTCGATCC
ACTTGCTTTGTCGACTCGGTTGTAACATCTCCATTATACTATAACGCTCCACAATGATAC
TTCCCCAACTTAAAGAAAATTTCTTACTTACCTCAACAAGGATACCGTCACCGCTAACCC
CAACAATACCATCTTATTTTGATACATCCATGGACCTAACCATTTCCTTTGCATGCCACT
GCTACTTGGTTTCTGCCCGCCATATCTCCTGTCCTCCCCATTGCCCTATCCCCTCCACGC
ATCTCGCAAACACACTCTCCACCTTCATACACCCCCACTCTTCTTCTCCCTTCACGCCTC
TCTCTTCTGCCGCGCTTTACTGCCCTCCGTTCCCAATCTCTTCTCCCCCCCTCCCGCTCC
TCCTTTCCCTGCATT
GenBank Accession BX894352 [GenBank]
Graphic View Graphic view of gene At4g21540
Predicted Position of Insertion Chr4:11460579 - go to primer design
BLAST e Value 3e-56
Hit Clone Code (BAC ID) F18E5
Hit Gene Code At4g21540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sphingosine kinase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX894352 [GenBank]


Last Updated on 10.06.2021 13:37