SimpleSearch - Line and FST details
Line specific information
| Line ID | 692F09 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N466405) |
| Segregation Analysis | 50:28:17 |
| Confirmed for Hit | At1g55210 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 417, 11241, 84814, 84815, 84818, 84820 |
Gene hit At1g55210
| Sequence (A. th genome BLAST matches underlined) | >70-K025067-022-692-F09-8409 NNNTTCCGTGCTATTCCGGACATNAGCCATTTACAATTGAATATATCGAGCACGAACACT TTGATGTGGATAATGTTTCCCCTTTTAGTGGATTCCTTCACGAGTGTCAGGACCATGAAT CTTATTAAGTCTTCACTGGCACGGGATCCTCACTACACGGAGAGAAAGAGGATTTGGACG GCGAGGAAGAAAATGAGCTTAGCCATGTGTTTTGTTGTGGTTTTGGTTACTATGGTTGGT TTGTTTACCTACGTGGTGTAAAAAACAAGGTGGTGTGATGCTTTTATATATATGTCAAAT TTTAGACATCTTTCTAGAAATTAATTAAAACAAAATATCTTGTTTAATTCCTGGATTCGT TTAATATTTTTCTGAAGTAGCTACAGAATATTGACTAGGGTATGGACGAATTTTAGTTTA TTTACCAAATAAAAAAACGTAATCGGGTGTGGGTC |
| GenBank Accession | BX943811 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:20598473 - go to primer design |
| BLAST e Value | 3e-130 |
| Hit Clone Code (BAC ID) | F7A10 |
| Hit Gene Code | At1g55210 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Disease resistance-responsive (dirigent-like protein) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g64530
| Sequence (A. th genome BLAST matches underlined) | >70-K025071-022-692-F09-8409 TTTACATTGAATATAATGACTATGAACAAAGCAATGTTGATAATGGTTCACCAATTAATA GATTCCTTCCGAGGGAATAAAAAAGAAAGTTATTAGGTAAAGACTGGTATGGGATCCTCC CTATAGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN |
| GenBank Accession | BX943812 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:25795868 - go to primer design |
| BLAST e Value | 4e-46 |
| Hit Clone Code (BAC ID) | MUB3 |
| Hit Gene Code | At5g64530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | xylem NAC domain 1 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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