SimpleSearch - Line and FST details
Line specific information
| Line ID | 695B04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N466640) |
| Segregation Analysis | 60:47:46 |
| Confirmed for Hit | At1g17830 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g17830
| Sequence (A. th genome BLAST matches underlined) | >26-K024558-022-695-B04-8409 GAAGATAACTCTGACATGAAGCCATTTACAATTGGATACTAATAAAACCCAAAGAACGGA GAAAAAAATTGTAAGCTAGTTAGGTTTTTGATGCAAGATGAAGAGAATGAGGTCACAAAA TTTGAAATGGATGAGAACCTTACCGGTATGAGGAACACGCAAGTGCGGTTTAACGGACTC ATAGTACTGAAAATCAATAGAACCGAGCTTATCTCGCATCAATGAAGAAGTACCATCGAT CTCATAACCCGAATCATCAGAAACAGAATCCCATATTTTGCTAGAACCACTGCTCATTGA CCTATGGGATCCTCCCTATAGTGAGACTACGGACCTCCTCTCTTTAGCGGAATCTACGTC ACCTCTGTGAATCCAGCAAAAACCAATGAGTGACTCCTCTGATTCCTGGAAGCGTAGCCC CTCAGAGTATCACATCGCTTGTCGAATGACATGATCACAGCAGAGATATATACGAGCTCA GAGACGCATCATAATGCTGCATGGGGCATTGACGGCAAGAACACGA |
| GenBank Accession | BX944110 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:6136796 - go to primer design |
| BLAST e Value | 1e-123 |
| Hit Clone Code (BAC ID) | F2H15 |
| Hit Gene Code | At1g17830 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein (DUF789) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K13N2
| Sequence (A. th genome BLAST matches underlined) | >26-K024553-022-695-B04-8409 GTTTGCAAGTTTTCTTTTGATGTCTATCCATTATAAACCTAGCTATTATACAGTGCGGTG AACCATATCACATCCTGTGCTATGTTACAGATTATAAGAACACATATATGAATGCACCTG GAGAGAACTCCACCAAGTGTTGAAGTACAAAGAAGTGACCCTACAACTATGTGTACCGAT AATGTTGACTCCTTTCTTGACTTATGTATAATAATAATATCTGAAACATTGCGTGATACC GATGACTACATCTACATGCACACCAAAAACACTTTAACTATGGGATCCTCCCTATAGTGA GCAACCTTCAAGATGATGCTGCAAAAATCGGAGGAAGAGTTTGGGTTTAGGCAAGAGAGC GGCCTCACCATTCCTTGTGACCAAAACACCTTTCTCACTCTCTTATACTCAATCACATCT TACTAGCTATGGAATCCTCCCTATAATGAGTATCTGCAGAGCACCTTATTATCCAGGGT |
| GenBank Accession | BX944109 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:9372556 - go to primer design |
| BLAST e Value | 1e-64 |
| Hit Clone Code (BAC ID) | K13N2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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