SimpleSearch - Line and FST details


Line specific information

 
Line ID 697G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N466890)
Segregation Analysis 50:48:44
Confirmed for Hit At1g11362
Parent of DUPLO pair 11985
Parent of pair(s) none

Gene hit At3g63530

 
Sequence (A. th genome BLAST matches underlined) 
>15-K024555-022-697-G02-8409
NTTTCCGCATTATATCGGACATNAGCCATTTACAATTGAATATATCCCGGACATGCATTC
ACAATGATATCGTGACTTGCACGGAAGATTCATTTGCCTCTCCCCTATCCTGTAGTTGAG
CTGGTATATCACACACCTGCTCATCACAAGCACACTTATCACTTTATCATCATAATCCTG
TGACCAACATTATTACAAGCTTGCTATTTACCTCTCCCCAGCTCTTTTCCTGGAGAAGAT
GCTCCCAAACTTATACTTTTTAGTGGGAAGCGTTTCTATGAGTTCCTGAGACAACCCCCT
GCTTTCTGTTCCTACTGCTTCCCCCAGCTCTACTAATTCCTGATCCACAAACCAAACAAC
TTATTTGTTGTCCCGCATCTATGGGATCCTCCCTATAGTGAGACNTATTANTCN
GenBank Accession BX944409 [GenBank]
Graphic View Graphic view of gene At3g63530
Predicted Position of Insertion Chr3:23456567 - go to primer design
BLAST e Value 1e-160
Hit Clone Code (BAC ID) MAA21
Hit Gene Code At3g63530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g11362

 
Sequence (A. th genome BLAST matches underlined) 
>15-K024560-022-697-G02-8409
TCACCAATCCCTTAATACACCGATTTTTGACAATAGAACTATCTTTGAAGAGTTGTGCAT
TACGTTTGACACTTGACCACTCTTCTTCATCCCCCCGTGCCCGTCATTATTACATTCTTG
CCTCCTTTCTCTCCCGATCTCTTCCCTGGATGCCAATTGTCCCGAACCTTCACTCTTTTC
ATCCAATACCTTTCTCAAACGTTCCTACACATACCTGAGACGACCCTTTATCCCGATGCC
ACCCTCCCTATAATGTCCCGATCCACACACCAAACAACTTATTTGTTGTCCCGCATCTAT
GGGATCCTCCCTATACTGAGTTGAACTACTCCCTCA
GenBank Accession BX944410 [GenBank]
Graphic View Graphic view of gene At1g11362
Predicted Position of Insertion Chr1:3824639 - go to primer design
BLAST e Value 2e-14
Hit Clone Code (BAC ID) T23J18
Hit Gene Code At1g11362 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant invertase/pectin methylesterase inhibitor superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37