SimpleSearch - Line and FST details
Line specific information
| Line ID | 699E04 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N467060) |
| Segregation Analysis | 50:48:38 |
| Confirmed for Hit | At1g12080 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4879, 4949, 10150, 94502, 94504, 94505 |
Gene hit At1g12080
| Sequence (A. th genome BLAST matches underlined) | >29-K025073-022-699-E04-8409 AGCCATTTACAATTGAATATATCCTGTCCAATGATCACTTTTAAAGAGGAAGGAAGAAGC TATATATGACCTTTTTTGGTCTCATATCGTTTTCTGTTTATTTTATTTTATCAACATTTC ATAAGTATTTTCTATGTTTGTTGGGTTTGTTATGATGAAATCAGATGTTTGGATCTTTTA ATGGTTGCTACATTGTTTACATGCTTGGTCGTAGCAACAAGGTATGGGATCCTCCCTATA GTGAGTGTATAAACCACCATCTTGCAAAACATCCAGAAATCATTAAATCCCCCTACTGAG GTTGTCTACGTGGAGGACCCAAATCAAGATACAGCGAAGCTTCACACCGACGCAGCATAC ACAATTGTGGTCGTCTAACAAACCCCTTACACATAGACCTTTGGGGACACCCCCCCGCTG GATATAACCAATCCAGGTCCAAATACGCTCA |
| GenBank Accession | BX944552 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4084880 - go to primer design |
| BLAST e Value | 9e-41 |
| Hit Clone Code (BAC ID) | F12F1 |
| Hit Gene Code | At1g12080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Vacuolar calcium-binding protein-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g62710
| Sequence (A. th genome BLAST matches underlined) | >29-K025070-022-699-E04-8409 NNTTTCGCGTAATCCGGACATGAGCCATTTACATTGAATATATCCTGTCCAATGATCACT TTTAAAGAGGAAGGAAGAAGCTATATATGACCCTTTTTTGGGCTCATATCAGATTTCGGT TTATTTTAATTTATCAACATTTCACAAGTATTTTCCATGTTTGTTGGGTTTGTTACGATG ATTGCTGATGTCCGGAACCTTTCCTGTTATGCTACATGGTTAACATGCTTGACCGAATCA TCCAAGTATGGTATCCCCCCTATAATGAGTGTAGGAACCACCATATTGGAAGCCATCCAG AAAGCAGTAGATCCCACTACTGAGGTTGTCTACGTGGAGGAACCAAACCAAGATACAGCG AAGCTTCACGCCGACGCAGCATACACAATTGTGGTCGTCGGAGAAACCCCTTACGCAGAG ACATTTGGGGACAGCCCCACGCTGGGTATAACCAAGCCAGGTCCAGACACGCTCAGCCAC ACGTGTGGTAGTGGGATGAAGTGTCTAGTGATCCTAATCCCTGGACGTCCGCTCGTGAAC CAACCTTACNTTGATATGCTCGATGCTCTTGCAGCCGCATGGCTTCCCG |
| GenBank Accession | BX944551 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:23198430 - go to primer design |
| BLAST e Value | 3e-167 |
| Hit Clone Code (BAC ID) | F26K9 |
| Hit Gene Code | At3g62710 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Glycosyl hydrolase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX944552 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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